Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CCDC71LQ8N9Z2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC71LQ8N9Z2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CCDC71LQ8N9Z2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17■□□□□ 0.31
CCDC71LQ8N9Z2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC71LQ8N9Z2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17■□□□□ 0.31
CCDC71LQ8N9Z2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17■□□□□ 0.31
CCDC71LQ8N9Z2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17■□□□□ 0.31
CCDC71LQ8N9Z2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17■□□□□ 0.31
CCDC71LQ8N9Z2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC71LQ8N9Z2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17■□□□□ 0.31
CCDC71LQ8N9Z2 AC055733.4-201ENST00000638462 1354 ntBASIC17■□□□□ 0.31
CCDC71LQ8N9Z2 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC71LQ8N9Z2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17■□□□□ 0.31
CCDC71LQ8N9Z2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17■□□□□ 0.31
CCDC71LQ8N9Z2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC71LQ8N9Z2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC71LQ8N9Z2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC71LQ8N9Z2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC71LQ8N9Z2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC71LQ8N9Z2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC71LQ8N9Z2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC71LQ8N9Z2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC71LQ8N9Z2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC71LQ8N9Z2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC71LQ8N9Z2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC71LQ8N9Z2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC71LQ8N9Z2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CCDC71LQ8N9Z2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CCDC71LQ8N9Z2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC71LQ8N9Z2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC71LQ8N9Z2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC71LQ8N9Z2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC71LQ8N9Z2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC71LQ8N9Z2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC71LQ8N9Z2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
CCDC71LQ8N9Z2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71LQ8N9Z2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC71LQ8N9Z2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CCDC71LQ8N9Z2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC71LQ8N9Z2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC71LQ8N9Z2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC71LQ8N9Z2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC71LQ8N9Z2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC71LQ8N9Z2 SMG8-203ENST00000578922 2178 ntBASIC16.97■□□□□ 0.31
CCDC71LQ8N9Z2 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC71LQ8N9Z2 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.97■□□□□ 0.31
CCDC71LQ8N9Z2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.97■□□□□ 0.31
CCDC71LQ8N9Z2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC71LQ8N9Z2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC71LQ8N9Z2 RNF165-205ENST00000588679 2904 ntBASIC16.97■□□□□ 0.31
CCDC71LQ8N9Z2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC71LQ8N9Z2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC71LQ8N9Z2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC71LQ8N9Z2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CCDC71LQ8N9Z2 AP004607.4-201ENST00000530158 1459 ntBASIC16.97■□□□□ 0.31
CCDC71LQ8N9Z2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC71LQ8N9Z2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC71LQ8N9Z2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC71LQ8N9Z2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC71LQ8N9Z2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC71LQ8N9Z2 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC71LQ8N9Z2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC71LQ8N9Z2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC71LQ8N9Z2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC71LQ8N9Z2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC71LQ8N9Z2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC71LQ8N9Z2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC71LQ8N9Z2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms