Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.09■□□□□ 0.65
CLIP4Q8N3C7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.09■□□□□ 0.65
CLIP4Q8N3C7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CLIP4Q8N3C7 ZNRF2P3-201ENST00000424200 374 ntBASIC19.09■□□□□ 0.65
CLIP4Q8N3C7 AC123595.1-201ENST00000440769 1046 ntBASIC19.09■□□□□ 0.65
CLIP4Q8N3C7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.09■□□□□ 0.65
CLIP4Q8N3C7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIP4Q8N3C7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CLIP4Q8N3C7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIP4Q8N3C7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CLIP4Q8N3C7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLIP4Q8N3C7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CLIP4Q8N3C7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.09■□□□□ 0.65
CLIP4Q8N3C7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
CLIP4Q8N3C7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
CLIP4Q8N3C7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIP4Q8N3C7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIP4Q8N3C7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIP4Q8N3C7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CLIP4Q8N3C7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIP4Q8N3C7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLIP4Q8N3C7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLIP4Q8N3C7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLIP4Q8N3C7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLIP4Q8N3C7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CLIP4Q8N3C7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLIP4Q8N3C7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLIP4Q8N3C7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.08■□□□□ 0.64
CLIP4Q8N3C7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CLIP4Q8N3C7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CLIP4Q8N3C7 TERF1P2-201ENST00000583350 1212 ntBASIC19.08■□□□□ 0.64
CLIP4Q8N3C7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLIP4Q8N3C7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLIP4Q8N3C7 AC007225.1-201ENST00000566331 1836 ntBASIC19.08■□□□□ 0.64
CLIP4Q8N3C7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLIP4Q8N3C7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CLIP4Q8N3C7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLIP4Q8N3C7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CLIP4Q8N3C7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.07■□□□□ 0.64
CLIP4Q8N3C7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
CLIP4Q8N3C7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.07■□□□□ 0.64
CLIP4Q8N3C7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIP4Q8N3C7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIP4Q8N3C7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLIP4Q8N3C7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIP4Q8N3C7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CLIP4Q8N3C7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIP4Q8N3C7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CLIP4Q8N3C7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLIP4Q8N3C7 YBX1P1-201ENST00000445822 960 ntBASIC19.07■□□□□ 0.64
CLIP4Q8N3C7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.07■□□□□ 0.64
CLIP4Q8N3C7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.07■□□□□ 0.64
CLIP4Q8N3C7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.07■□□□□ 0.64
CLIP4Q8N3C7 AC104187.1-201ENST00000607510 612 ntBASIC19.07■□□□□ 0.64
CLIP4Q8N3C7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIP4Q8N3C7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CLIP4Q8N3C7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIP4Q8N3C7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIP4Q8N3C7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIP4Q8N3C7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CLIP4Q8N3C7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.06■□□□□ 0.64
CLIP4Q8N3C7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
CLIP4Q8N3C7 AC011484.1-201ENST00000377652 1995 ntBASIC19.06■□□□□ 0.64
CLIP4Q8N3C7 AP005212.1-201ENST00000581547 1997 ntBASIC19.06■□□□□ 0.64
CLIP4Q8N3C7 AC087289.5-201ENST00000586076 3175 ntBASIC19.06■□□□□ 0.64
CLIP4Q8N3C7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLIP4Q8N3C7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIP4Q8N3C7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.06■□□□□ 0.64
CLIP4Q8N3C7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.06■□□□□ 0.64
CLIP4Q8N3C7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CLIP4Q8N3C7 AC010141.2-201ENST00000452426 721 ntBASIC19.06■□□□□ 0.64
CLIP4Q8N3C7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.06■□□□□ 0.64
CLIP4Q8N3C7 CCDC92B-201ENST00000575506 885 ntBASIC19.06■□□□□ 0.64
CLIP4Q8N3C7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIP4Q8N3C7 RARRES2P11-201ENST00000635158 484 ntBASIC19.06■□□□□ 0.64
CLIP4Q8N3C7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIP4Q8N3C7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIP4Q8N3C7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIP4Q8N3C7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIP4Q8N3C7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLIP4Q8N3C7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLIP4Q8N3C7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIP4Q8N3C7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIP4Q8N3C7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIP4Q8N3C7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.05■□□□□ 0.64
CLIP4Q8N3C7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.05■□□□□ 0.64
CLIP4Q8N3C7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIP4Q8N3C7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIP4Q8N3C7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIP4Q8N3C7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLIP4Q8N3C7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.05■□□□□ 0.64
CLIP4Q8N3C7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.05■□□□□ 0.64
CLIP4Q8N3C7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.05■□□□□ 0.64
CLIP4Q8N3C7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.05■□□□□ 0.64
CLIP4Q8N3C7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLIP4Q8N3C7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIP4Q8N3C7 SLC7A5P2-201ENST00000553010 536 ntBASIC19.05■□□□□ 0.64
CLIP4Q8N3C7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.05■□□□□ 0.64
CLIP4Q8N3C7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.05■□□□□ 0.64
CLIP4Q8N3C7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms