Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01561Q8N1V8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01561Q8N1V8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01561Q8N1V8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01561Q8N1V8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LINC01561Q8N1V8 TCF3P1-201ENST00000423021 1937 ntBASIC13.71□□□□□ -0.21
LINC01561Q8N1V8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC13.71□□□□□ -0.21
LINC01561Q8N1V8 EDA-201ENST00000338901 1233 ntBASIC13.71□□□□□ -0.21
LINC01561Q8N1V8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC01561Q8N1V8 BID-204ENST00000399767 2129 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC01561Q8N1V8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01561Q8N1V8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC01561Q8N1V8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC01561Q8N1V8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC01561Q8N1V8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01561Q8N1V8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC01561Q8N1V8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC13.71□□□□□ -0.21
LINC01561Q8N1V8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01561Q8N1V8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01561Q8N1V8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC01561Q8N1V8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01561Q8N1V8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01561Q8N1V8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC01561Q8N1V8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC01561Q8N1V8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC01561Q8N1V8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LINC01561Q8N1V8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
LINC01561Q8N1V8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC13.71□□□□□ -0.22
LINC01561Q8N1V8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC01561Q8N1V8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC01561Q8N1V8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LINC01561Q8N1V8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01561Q8N1V8 AL020996.1-203ENST00000536896 2307 ntBASIC13.7□□□□□ -0.22
LINC01561Q8N1V8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC01561Q8N1V8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC01561Q8N1V8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC01561Q8N1V8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC01561Q8N1V8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC01561Q8N1V8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01561Q8N1V8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01561Q8N1V8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC01561Q8N1V8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01561Q8N1V8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC01561Q8N1V8 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01561Q8N1V8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01561Q8N1V8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC13.7□□□□□ -0.22
LINC01561Q8N1V8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01561Q8N1V8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01561Q8N1V8 AC138907.5-202ENST00000569484 235 ntBASIC13.7□□□□□ -0.22
LINC01561Q8N1V8 AL354811.1-201ENST00000610286 706 ntBASIC13.7□□□□□ -0.22
LINC01561Q8N1V8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
LINC01561Q8N1V8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC01561Q8N1V8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01561Q8N1V8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC01561Q8N1V8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC01561Q8N1V8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC13.7□□□□□ -0.22
LINC01561Q8N1V8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01561Q8N1V8 RASA4CP-201ENST00000424092 1398 ntBASIC13.7□□□□□ -0.22
LINC01561Q8N1V8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 AC116050.2-201ENST00000612102 1779 ntBASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01561Q8N1V8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms