Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS52Q8N1B4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
VPS52Q8N1B4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.16■■□□□ 1.14
VPS52Q8N1B4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC22.16■■□□□ 1.14
VPS52Q8N1B4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
VPS52Q8N1B4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
VPS52Q8N1B4 AC008403.3-201ENST00000598924 454 ntBASIC22.16■■□□□ 1.14
VPS52Q8N1B4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.16■■□□□ 1.14
VPS52Q8N1B4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.16■■□□□ 1.14
VPS52Q8N1B4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS52Q8N1B4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
VPS52Q8N1B4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
VPS52Q8N1B4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
VPS52Q8N1B4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS52Q8N1B4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS52Q8N1B4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VPS52Q8N1B4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VPS52Q8N1B4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.15■■□□□ 1.14
VPS52Q8N1B4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS52Q8N1B4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS52Q8N1B4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VPS52Q8N1B4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VPS52Q8N1B4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS52Q8N1B4 KRT18P68-201ENST00000392293 1000 ntBASIC22.15■■□□□ 1.14
VPS52Q8N1B4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC22.15■■□□□ 1.14
VPS52Q8N1B4 AL596275.1-201ENST00000423464 877 ntBASIC22.15■■□□□ 1.14
VPS52Q8N1B4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC22.15■■□□□ 1.14
VPS52Q8N1B4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS52Q8N1B4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS52Q8N1B4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VPS52Q8N1B4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS52Q8N1B4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
VPS52Q8N1B4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
VPS52Q8N1B4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
VPS52Q8N1B4 FAM99A-202ENST00000538190 1989 ntBASIC22.14■■□□□ 1.14
VPS52Q8N1B4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
VPS52Q8N1B4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
VPS52Q8N1B4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VPS52Q8N1B4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.14■■□□□ 1.13
VPS52Q8N1B4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.14■■□□□ 1.13
VPS52Q8N1B4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VPS52Q8N1B4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VPS52Q8N1B4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
VPS52Q8N1B4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.14■■□□□ 1.13
VPS52Q8N1B4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
VPS52Q8N1B4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VPS52Q8N1B4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS52Q8N1B4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
VPS52Q8N1B4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS52Q8N1B4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
VPS52Q8N1B4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.13■■□□□ 1.13
VPS52Q8N1B4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS52Q8N1B4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.13■■□□□ 1.13
VPS52Q8N1B4 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.13■■□□□ 1.13
VPS52Q8N1B4 AC007322.3-201ENST00000426526 701 ntBASIC22.13■■□□□ 1.13
VPS52Q8N1B4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.13■■□□□ 1.13
VPS52Q8N1B4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.13■■□□□ 1.13
VPS52Q8N1B4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC22.13■■□□□ 1.13
VPS52Q8N1B4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
VPS52Q8N1B4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
VPS52Q8N1B4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
VPS52Q8N1B4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS52Q8N1B4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
VPS52Q8N1B4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.13■■□□□ 1.13
VPS52Q8N1B4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS52Q8N1B4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VPS52Q8N1B4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.12■■□□□ 1.13
VPS52Q8N1B4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.12■■□□□ 1.13
VPS52Q8N1B4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.12■■□□□ 1.13
VPS52Q8N1B4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VPS52Q8N1B4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
VPS52Q8N1B4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
VPS52Q8N1B4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
VPS52Q8N1B4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC22.12■■□□□ 1.13
VPS52Q8N1B4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
VPS52Q8N1B4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VPS52Q8N1B4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC22.12■■□□□ 1.13
VPS52Q8N1B4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
VPS52Q8N1B4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.12■■□□□ 1.13
VPS52Q8N1B4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC22.12■■□□□ 1.13
VPS52Q8N1B4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
VPS52Q8N1B4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC22.12■■□□□ 1.13
VPS52Q8N1B4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.12■■□□□ 1.13
VPS52Q8N1B4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
VPS52Q8N1B4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VPS52Q8N1B4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.12■■□□□ 1.13
VPS52Q8N1B4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VPS52Q8N1B4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.12■■□□□ 1.13
VPS52Q8N1B4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VPS52Q8N1B4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.12■■□□□ 1.13
VPS52Q8N1B4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.11■■□□□ 1.13
VPS52Q8N1B4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
VPS52Q8N1B4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.11■■□□□ 1.13
VPS52Q8N1B4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
VPS52Q8N1B4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
VPS52Q8N1B4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
VPS52Q8N1B4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
VPS52Q8N1B4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
VPS52Q8N1B4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC22.11■■□□□ 1.13
VPS52Q8N1B4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms