Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
C9orf40Q8IXQ3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
C9orf40Q8IXQ3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.93■□□□□ 0.62
C9orf40Q8IXQ3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.93■□□□□ 0.62
C9orf40Q8IXQ3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C9orf40Q8IXQ3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
C9orf40Q8IXQ3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.93■□□□□ 0.62
C9orf40Q8IXQ3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
C9orf40Q8IXQ3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
C9orf40Q8IXQ3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C9orf40Q8IXQ3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C9orf40Q8IXQ3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
C9orf40Q8IXQ3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
C9orf40Q8IXQ3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
C9orf40Q8IXQ3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.93■□□□□ 0.62
C9orf40Q8IXQ3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
C9orf40Q8IXQ3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
C9orf40Q8IXQ3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.93■□□□□ 0.62
C9orf40Q8IXQ3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C9orf40Q8IXQ3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
C9orf40Q8IXQ3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C9orf40Q8IXQ3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.93■□□□□ 0.62
C9orf40Q8IXQ3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.93■□□□□ 0.62
C9orf40Q8IXQ3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
C9orf40Q8IXQ3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
C9orf40Q8IXQ3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
C9orf40Q8IXQ3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
C9orf40Q8IXQ3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C9orf40Q8IXQ3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C9orf40Q8IXQ3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.92■□□□□ 0.62
C9orf40Q8IXQ3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
C9orf40Q8IXQ3 PGM5P4-201ENST00000421970 445 ntBASIC18.92■□□□□ 0.62
C9orf40Q8IXQ3 AC073210.2-201ENST00000430369 194 ntBASIC18.92■□□□□ 0.62
C9orf40Q8IXQ3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
C9orf40Q8IXQ3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.92■□□□□ 0.62
C9orf40Q8IXQ3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C9orf40Q8IXQ3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.92■□□□□ 0.62
C9orf40Q8IXQ3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
C9orf40Q8IXQ3 AL356652.1-201ENST00000615962 565 ntBASIC18.92■□□□□ 0.62
C9orf40Q8IXQ3 AC133041.1-202ENST00000642053 222 ntBASIC18.92■□□□□ 0.62
C9orf40Q8IXQ3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C9orf40Q8IXQ3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.92■□□□□ 0.62
C9orf40Q8IXQ3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
C9orf40Q8IXQ3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
C9orf40Q8IXQ3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
C9orf40Q8IXQ3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C9orf40Q8IXQ3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
C9orf40Q8IXQ3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C9orf40Q8IXQ3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
C9orf40Q8IXQ3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
C9orf40Q8IXQ3 DUSP5P2-201ENST00000426873 1033 ntBASIC18.91■□□□□ 0.62
C9orf40Q8IXQ3 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.91■□□□□ 0.62
C9orf40Q8IXQ3 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.91■□□□□ 0.62
C9orf40Q8IXQ3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.91■□□□□ 0.62
C9orf40Q8IXQ3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.91■□□□□ 0.62
C9orf40Q8IXQ3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.91■□□□□ 0.62
C9orf40Q8IXQ3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.91■□□□□ 0.62
C9orf40Q8IXQ3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
C9orf40Q8IXQ3 FP700111.2-201ENST00000619190 1892 ntBASIC18.9■□□□□ 0.62
C9orf40Q8IXQ3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
C9orf40Q8IXQ3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
C9orf40Q8IXQ3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
C9orf40Q8IXQ3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
C9orf40Q8IXQ3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
C9orf40Q8IXQ3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
C9orf40Q8IXQ3 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.9■□□□□ 0.62
C9orf40Q8IXQ3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.9■□□□□ 0.62
C9orf40Q8IXQ3 AL121603.2-201ENST00000557373 2117 ntBASIC18.9■□□□□ 0.62
C9orf40Q8IXQ3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
C9orf40Q8IXQ3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
C9orf40Q8IXQ3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.9■□□□□ 0.62
C9orf40Q8IXQ3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.9■□□□□ 0.62
C9orf40Q8IXQ3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
C9orf40Q8IXQ3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
C9orf40Q8IXQ3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.9■□□□□ 0.62
C9orf40Q8IXQ3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
C9orf40Q8IXQ3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
C9orf40Q8IXQ3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C9orf40Q8IXQ3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C9orf40Q8IXQ3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
C9orf40Q8IXQ3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.89■□□□□ 0.61
C9orf40Q8IXQ3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C9orf40Q8IXQ3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
C9orf40Q8IXQ3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
C9orf40Q8IXQ3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.89■□□□□ 0.61
C9orf40Q8IXQ3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.89■□□□□ 0.61
C9orf40Q8IXQ3 AC091874.3-201ENST00000512672 1195 ntBASIC18.89■□□□□ 0.61
C9orf40Q8IXQ3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.89■□□□□ 0.61
C9orf40Q8IXQ3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.89■□□□□ 0.61
C9orf40Q8IXQ3 MYC-209ENST00000641252 345 ntBASIC18.89■□□□□ 0.61
C9orf40Q8IXQ3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C9orf40Q8IXQ3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
C9orf40Q8IXQ3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.89■□□□□ 0.61
C9orf40Q8IXQ3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C9orf40Q8IXQ3 KRT8P36-201ENST00000489121 1440 ntBASIC18.89■□□□□ 0.61
C9orf40Q8IXQ3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
C9orf40Q8IXQ3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
C9orf40Q8IXQ3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C9orf40Q8IXQ3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.89■□□□□ 0.61
C9orf40Q8IXQ3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms