Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM48Q8IWZ4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM48Q8IWZ4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TRIM48Q8IWZ4 AL589743.5-201ENST00000616611 1050 ntBASIC20.05■□□□□ 0.8
TRIM48Q8IWZ4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM48Q8IWZ4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM48Q8IWZ4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM48Q8IWZ4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM48Q8IWZ4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRIM48Q8IWZ4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM48Q8IWZ4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM48Q8IWZ4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM48Q8IWZ4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM48Q8IWZ4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM48Q8IWZ4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM48Q8IWZ4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM48Q8IWZ4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM48Q8IWZ4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM48Q8IWZ4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM48Q8IWZ4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.04■□□□□ 0.8
TRIM48Q8IWZ4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM48Q8IWZ4 DUSP5P2-201ENST00000426873 1033 ntBASIC20.04■□□□□ 0.8
TRIM48Q8IWZ4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM48Q8IWZ4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.04■□□□□ 0.8
TRIM48Q8IWZ4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM48Q8IWZ4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM48Q8IWZ4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM48Q8IWZ4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
TRIM48Q8IWZ4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TRIM48Q8IWZ4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM48Q8IWZ4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM48Q8IWZ4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM48Q8IWZ4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TRIM48Q8IWZ4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM48Q8IWZ4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM48Q8IWZ4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
TRIM48Q8IWZ4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM48Q8IWZ4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TRIM48Q8IWZ4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TRIM48Q8IWZ4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM48Q8IWZ4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM48Q8IWZ4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.03■□□□□ 0.8
TRIM48Q8IWZ4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TRIM48Q8IWZ4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM48Q8IWZ4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM48Q8IWZ4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TRIM48Q8IWZ4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM48Q8IWZ4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.03■□□□□ 0.8
TRIM48Q8IWZ4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRIM48Q8IWZ4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM48Q8IWZ4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM48Q8IWZ4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.03■□□□□ 0.8
TRIM48Q8IWZ4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM48Q8IWZ4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM48Q8IWZ4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM48Q8IWZ4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM48Q8IWZ4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TRIM48Q8IWZ4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM48Q8IWZ4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM48Q8IWZ4 KRT17P1-201ENST00000399211 1546 ntBASIC20.02■□□□□ 0.8
TRIM48Q8IWZ4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TRIM48Q8IWZ4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM48Q8IWZ4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM48Q8IWZ4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TRIM48Q8IWZ4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TRIM48Q8IWZ4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM48Q8IWZ4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM48Q8IWZ4 KRT18P68-201ENST00000392293 1000 ntBASIC20.02■□□□□ 0.8
TRIM48Q8IWZ4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM48Q8IWZ4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TRIM48Q8IWZ4 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.02■□□□□ 0.8
TRIM48Q8IWZ4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.02■□□□□ 0.8
TRIM48Q8IWZ4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TRIM48Q8IWZ4 AC091874.3-201ENST00000512672 1195 ntBASIC20.02■□□□□ 0.8
TRIM48Q8IWZ4 RNA5SP413-201ENST00000516373 109 ntBASIC20.02■□□□□ 0.8
TRIM48Q8IWZ4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM48Q8IWZ4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM48Q8IWZ4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TRIM48Q8IWZ4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM48Q8IWZ4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM48Q8IWZ4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM48Q8IWZ4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
TRIM48Q8IWZ4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM48Q8IWZ4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM48Q8IWZ4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM48Q8IWZ4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM48Q8IWZ4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.01■□□□□ 0.79
TRIM48Q8IWZ4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM48Q8IWZ4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM48Q8IWZ4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TRIM48Q8IWZ4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM48Q8IWZ4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TRIM48Q8IWZ4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TRIM48Q8IWZ4 CYP21A1P-202ENST00000354927 1481 ntBASIC20.01■□□□□ 0.79
TRIM48Q8IWZ4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TRIM48Q8IWZ4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TRIM48Q8IWZ4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM48Q8IWZ4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIM48Q8IWZ4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.01■□□□□ 0.79
TRIM48Q8IWZ4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms