Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CHD1LQ86WJ1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CHD1LQ86WJ1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CHD1LQ86WJ1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CHD1LQ86WJ1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC25.32■■□□□ 1.64
CHD1LQ86WJ1 AC007322.3-201ENST00000426526 701 ntBASIC25.32■■□□□ 1.64
CHD1LQ86WJ1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CHD1LQ86WJ1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CHD1LQ86WJ1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CHD1LQ86WJ1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC25.32■■□□□ 1.64
CHD1LQ86WJ1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
CHD1LQ86WJ1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CHD1LQ86WJ1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC25.32■■□□□ 1.64
CHD1LQ86WJ1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHD1LQ86WJ1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC25.31■■□□□ 1.64
CHD1LQ86WJ1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHD1LQ86WJ1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHD1LQ86WJ1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CHD1LQ86WJ1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC25.31■■□□□ 1.64
CHD1LQ86WJ1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC25.31■■□□□ 1.64
CHD1LQ86WJ1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHD1LQ86WJ1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CHD1LQ86WJ1 AC099778.1-201ENST00000568593 1911 ntBASIC25.3■■□□□ 1.64
CHD1LQ86WJ1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CHD1LQ86WJ1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
CHD1LQ86WJ1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
CHD1LQ86WJ1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC25.3■■□□□ 1.64
CHD1LQ86WJ1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC25.3■■□□□ 1.64
CHD1LQ86WJ1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC25.3■■□□□ 1.64
CHD1LQ86WJ1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CHD1LQ86WJ1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
CHD1LQ86WJ1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC25.3■■□□□ 1.64
CHD1LQ86WJ1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CHD1LQ86WJ1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CHD1LQ86WJ1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC25.29■■□□□ 1.64
CHD1LQ86WJ1 AC112907.3-201ENST00000577781 2400 ntBASIC25.29■■□□□ 1.64
CHD1LQ86WJ1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC25.29■■□□□ 1.64
CHD1LQ86WJ1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC25.29■■□□□ 1.64
CHD1LQ86WJ1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHD1LQ86WJ1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHD1LQ86WJ1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHD1LQ86WJ1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC25.29■■□□□ 1.64
CHD1LQ86WJ1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHD1LQ86WJ1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
CHD1LQ86WJ1 SAPCD2P1-201ENST00000395413 1184 ntBASIC25.29■■□□□ 1.64
CHD1LQ86WJ1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC25.29■■□□□ 1.64
CHD1LQ86WJ1 UQCRFS1P1-201ENST00000435169 820 ntBASIC25.29■■□□□ 1.64
CHD1LQ86WJ1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHD1LQ86WJ1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
CHD1LQ86WJ1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC25.29■■□□□ 1.64
CHD1LQ86WJ1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC25.29■■□□□ 1.64
CHD1LQ86WJ1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC25.29■■□□□ 1.64
CHD1LQ86WJ1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC25.29■■□□□ 1.64
CHD1LQ86WJ1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC25.29■■□□□ 1.64
CHD1LQ86WJ1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
CHD1LQ86WJ1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
CHD1LQ86WJ1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CHD1LQ86WJ1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHD1LQ86WJ1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHD1LQ86WJ1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
CHD1LQ86WJ1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHD1LQ86WJ1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CHD1LQ86WJ1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHD1LQ86WJ1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC25.28■■□□□ 1.64
CHD1LQ86WJ1 PCDHAC2-203ENST00000615316 3011 ntBASIC25.28■■□□□ 1.64
CHD1LQ86WJ1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
CHD1LQ86WJ1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CHD1LQ86WJ1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC25.28■■□□□ 1.64
CHD1LQ86WJ1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC25.28■■□□□ 1.64
CHD1LQ86WJ1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC25.28■■□□□ 1.64
CHD1LQ86WJ1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.28■■□□□ 1.64
CHD1LQ86WJ1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC25.28■■□□□ 1.64
CHD1LQ86WJ1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
CHD1LQ86WJ1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHD1LQ86WJ1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC25.28■■□□□ 1.64
CHD1LQ86WJ1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHD1LQ86WJ1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC25.28■■□□□ 1.64
CHD1LQ86WJ1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC25.28■■□□□ 1.64
CHD1LQ86WJ1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC25.28■■□□□ 1.64
CHD1LQ86WJ1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC25.27■■□□□ 1.64
CHD1LQ86WJ1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHD1LQ86WJ1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
CHD1LQ86WJ1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC25.27■■□□□ 1.64
CHD1LQ86WJ1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC25.27■■□□□ 1.64
CHD1LQ86WJ1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHD1LQ86WJ1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CHD1LQ86WJ1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC25.27■■□□□ 1.64
CHD1LQ86WJ1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC25.27■■□□□ 1.64
CHD1LQ86WJ1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
CHD1LQ86WJ1 DBI-210ENST00000542275 757 ntTSL 5 BASIC25.27■■□□□ 1.64
CHD1LQ86WJ1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC25.27■■□□□ 1.64
CHD1LQ86WJ1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CHD1LQ86WJ1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHD1LQ86WJ1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CHD1LQ86WJ1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC25.27■■□□□ 1.64
CHD1LQ86WJ1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC25.27■■□□□ 1.64
CHD1LQ86WJ1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHD1LQ86WJ1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHD1LQ86WJ1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
CHD1LQ86WJ1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms