Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.82■□□□□ 0.6
ZNF550Q7Z398 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF550Q7Z398 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.82■□□□□ 0.6
ZNF550Q7Z398 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF550Q7Z398 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ZNF550Q7Z398 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.82■□□□□ 0.6
ZNF550Q7Z398 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.82■□□□□ 0.6
ZNF550Q7Z398 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.82■□□□□ 0.6
ZNF550Q7Z398 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.82■□□□□ 0.6
ZNF550Q7Z398 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF550Q7Z398 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF550Q7Z398 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF550Q7Z398 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF550Q7Z398 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF550Q7Z398 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.82■□□□□ 0.6
ZNF550Q7Z398 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF550Q7Z398 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF550Q7Z398 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.82■□□□□ 0.6
ZNF550Q7Z398 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
ZNF550Q7Z398 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF550Q7Z398 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF550Q7Z398 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ZNF550Q7Z398 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF550Q7Z398 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF550Q7Z398 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF550Q7Z398 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF550Q7Z398 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.81■□□□□ 0.6
ZNF550Q7Z398 CDCA4P2-201ENST00000441182 718 ntBASIC18.81■□□□□ 0.6
ZNF550Q7Z398 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF550Q7Z398 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.81■□□□□ 0.6
ZNF550Q7Z398 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.81■□□□□ 0.6
ZNF550Q7Z398 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.81■□□□□ 0.6
ZNF550Q7Z398 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.81■□□□□ 0.6
ZNF550Q7Z398 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.81■□□□□ 0.6
ZNF550Q7Z398 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF550Q7Z398 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.81■□□□□ 0.6
ZNF550Q7Z398 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.81■□□□□ 0.6
ZNF550Q7Z398 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF550Q7Z398 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF550Q7Z398 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF550Q7Z398 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF550Q7Z398 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF550Q7Z398 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
ZNF550Q7Z398 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF550Q7Z398 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF550Q7Z398 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.81■□□□□ 0.6
ZNF550Q7Z398 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF550Q7Z398 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF550Q7Z398 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF550Q7Z398 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.8■□□□□ 0.6
ZNF550Q7Z398 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF550Q7Z398 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF550Q7Z398 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF550Q7Z398 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.8■□□□□ 0.6
ZNF550Q7Z398 AC073314.1-201ENST00000568729 2216 ntBASIC18.8■□□□□ 0.6
ZNF550Q7Z398 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.8■□□□□ 0.6
ZNF550Q7Z398 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.8■□□□□ 0.6
ZNF550Q7Z398 AC091799.1-201ENST00000422823 811 ntBASIC18.8■□□□□ 0.6
ZNF550Q7Z398 AC007322.3-201ENST00000426526 701 ntBASIC18.8■□□□□ 0.6
ZNF550Q7Z398 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF550Q7Z398 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.8■□□□□ 0.6
ZNF550Q7Z398 UBE2DNL-204ENST00000602536 740 ntBASIC18.8■□□□□ 0.6
ZNF550Q7Z398 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ZNF550Q7Z398 MYCNOS-205ENST00000641950 531 ntBASIC18.8■□□□□ 0.6
ZNF550Q7Z398 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF550Q7Z398 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.8■□□□□ 0.6
ZNF550Q7Z398 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ZNF550Q7Z398 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF550Q7Z398 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF550Q7Z398 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF550Q7Z398 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.8■□□□□ 0.6
ZNF550Q7Z398 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF550Q7Z398 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF550Q7Z398 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF550Q7Z398 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF550Q7Z398 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF550Q7Z398 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.79■□□□□ 0.6
ZNF550Q7Z398 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ZNF550Q7Z398 HLA-L-209ENST00000420110 1011 ntBASIC18.79■□□□□ 0.6
ZNF550Q7Z398 CDV3P1-201ENST00000471403 739 ntBASIC18.79■□□□□ 0.6
ZNF550Q7Z398 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF550Q7Z398 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF550Q7Z398 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ZNF550Q7Z398 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF550Q7Z398 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.79■□□□□ 0.6
ZNF550Q7Z398 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ZNF550Q7Z398 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ZNF550Q7Z398 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF550Q7Z398 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF550Q7Z398 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF550Q7Z398 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ZNF550Q7Z398 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.79■□□□□ 0.6
ZNF550Q7Z398 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF550Q7Z398 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.79■□□□□ 0.6
ZNF550Q7Z398 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF550Q7Z398 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ZNF550Q7Z398 AC020907.5-201ENST00000624372 1936 ntBASIC18.78■□□□□ 0.6
ZNF550Q7Z398 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF550Q7Z398 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF550Q7Z398 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms