Protein–RNA interactions for Protein: Q6ZUF6

LINC00336, Putative uncharacterized protein encoded by LINC00336, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336Q6ZUF6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 AL445228.2-201ENST00000605589 952 ntBASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 EP400NL-214ENST00000641289 2402 ntBASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 ARMC10P1-201ENST00000313754 855 ntBASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 AC007322.3-201ENST00000426526 701 ntBASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
LINC00336Q6ZUF6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 PRKY-204ENST00000533551 1019 ntBASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00336Q6ZUF6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00336Q6ZUF6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00336Q6ZUF6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC00336Q6ZUF6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00336Q6ZUF6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00336Q6ZUF6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00336Q6ZUF6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00336Q6ZUF6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00336Q6ZUF6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC00336Q6ZUF6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00336Q6ZUF6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC00336Q6ZUF6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00336Q6ZUF6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00336Q6ZUF6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00336Q6ZUF6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
LINC00336Q6ZUF6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
LINC00336Q6ZUF6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
LINC00336Q6ZUF6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
LINC00336Q6ZUF6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms