Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RFWD3Q6PCD5 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RFWD3Q6PCD5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RFWD3Q6PCD5 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RFWD3Q6PCD5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RFWD3Q6PCD5 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.31■■□□□ 1
RFWD3Q6PCD5 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
RFWD3Q6PCD5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.31■■□□□ 1
RFWD3Q6PCD5 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.31■■□□□ 1
RFWD3Q6PCD5 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.31■■□□□ 1
RFWD3Q6PCD5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFWD3Q6PCD5 AF106564.1-201ENST00000607058 2553 ntBASIC21.31■■□□□ 1
RFWD3Q6PCD5 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFWD3Q6PCD5 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFWD3Q6PCD5 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.31■■□□□ 1
RFWD3Q6PCD5 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.31■■□□□ 1
RFWD3Q6PCD5 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.31■■□□□ 1
RFWD3Q6PCD5 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.31■■□□□ 1
RFWD3Q6PCD5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.31■■□□□ 1
RFWD3Q6PCD5 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.31■■□□□ 1
RFWD3Q6PCD5 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFWD3Q6PCD5 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RFWD3Q6PCD5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.31■■□□□ 1
RFWD3Q6PCD5 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.31■■□□□ 1
RFWD3Q6PCD5 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFWD3Q6PCD5 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
RFWD3Q6PCD5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.3■■□□□ 1
RFWD3Q6PCD5 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.3■■□□□ 1
RFWD3Q6PCD5 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.3■■□□□ 1
RFWD3Q6PCD5 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RFWD3Q6PCD5 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.3■■□□□ 1
RFWD3Q6PCD5 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.3■■□□□ 1
RFWD3Q6PCD5 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
RFWD3Q6PCD5 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.3■■□□□ 1
RFWD3Q6PCD5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
RFWD3Q6PCD5 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.3■■□□□ 1
RFWD3Q6PCD5 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RFWD3Q6PCD5 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFWD3Q6PCD5 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.29■■□□□ 1
RFWD3Q6PCD5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.29■■□□□ 1
RFWD3Q6PCD5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.29■■□□□ 1
RFWD3Q6PCD5 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
RFWD3Q6PCD5 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.29■■□□□ 1
RFWD3Q6PCD5 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.29■■□□□ 1
RFWD3Q6PCD5 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RFWD3Q6PCD5 FEM1AP4-201ENST00000443167 1987 ntBASIC21.29■■□□□ 1
RFWD3Q6PCD5 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RFWD3Q6PCD5 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
RFWD3Q6PCD5 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.29■■□□□ 1
RFWD3Q6PCD5 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.29■■□□□ 1
RFWD3Q6PCD5 AC069152.1-201ENST00000438030 544 ntBASIC21.29■■□□□ 1
RFWD3Q6PCD5 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.29■■□□□ 1
RFWD3Q6PCD5 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RFWD3Q6PCD5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RFWD3Q6PCD5 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.29■■□□□ 1
RFWD3Q6PCD5 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.29■■□□□ 1
RFWD3Q6PCD5 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
RFWD3Q6PCD5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.29■■□□□ 1
RFWD3Q6PCD5 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.29■■□□□ 1
RFWD3Q6PCD5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.28■■□□□ 1
RFWD3Q6PCD5 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RFWD3Q6PCD5 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RFWD3Q6PCD5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.28■■□□□ 1
RFWD3Q6PCD5 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.28■■□□□ 1
RFWD3Q6PCD5 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.28■■□□□ 1
RFWD3Q6PCD5 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.28■■□□□ 1
RFWD3Q6PCD5 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.28■■□□□ 1
RFWD3Q6PCD5 MIR4758-201ENST00000577688 71 ntBASIC21.28■■□□□ 1
RFWD3Q6PCD5 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.28■■□□□ 1
RFWD3Q6PCD5 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFWD3Q6PCD5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.28■■□□□ 1
RFWD3Q6PCD5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFWD3Q6PCD5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RFWD3Q6PCD5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFWD3Q6PCD5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
RFWD3Q6PCD5 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.28■■□□□ 1
RFWD3Q6PCD5 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFWD3Q6PCD5 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
RFWD3Q6PCD5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RFWD3Q6PCD5 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RFWD3Q6PCD5 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RFWD3Q6PCD5 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.27■■□□□ 1
RFWD3Q6PCD5 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.27■■□□□ 1
RFWD3Q6PCD5 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.27■■□□□ 1
RFWD3Q6PCD5 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
RFWD3Q6PCD5 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RFWD3Q6PCD5 AC133041.1-202ENST00000642053 222 ntBASIC21.27■■□□□ 1
RFWD3Q6PCD5 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.27■■□□□ 1
RFWD3Q6PCD5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
RFWD3Q6PCD5 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
RFWD3Q6PCD5 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RFWD3Q6PCD5 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RFWD3Q6PCD5 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.26■□□□□ 0.99
RFWD3Q6PCD5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RFWD3Q6PCD5 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFWD3Q6PCD5 KRT17P1-201ENST00000399211 1546 ntBASIC21.26■□□□□ 0.99
RFWD3Q6PCD5 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFWD3Q6PCD5 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFWD3Q6PCD5 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.26■□□□□ 0.99
RFWD3Q6PCD5 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms