Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PRPF40BQ6NWY9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC25.72■■□□□ 1.71
PRPF40BQ6NWY9 CRK-204ENST00000574295 1391 ntTSL 5 BASIC25.72■■□□□ 1.71
PRPF40BQ6NWY9 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PRPF40BQ6NWY9 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PRPF40BQ6NWY9 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PRPF40BQ6NWY9 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PRPF40BQ6NWY9 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PRPF40BQ6NWY9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PRPF40BQ6NWY9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC25.72■■□□□ 1.71
PRPF40BQ6NWY9 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC25.71■■□□□ 1.71
PRPF40BQ6NWY9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PRPF40BQ6NWY9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC25.71■■□□□ 1.71
PRPF40BQ6NWY9 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PRPF40BQ6NWY9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PRPF40BQ6NWY9 SAPCD2P1-201ENST00000395413 1184 ntBASIC25.71■■□□□ 1.71
PRPF40BQ6NWY9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC25.71■■□□□ 1.71
PRPF40BQ6NWY9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC25.71■■□□□ 1.71
PRPF40BQ6NWY9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC25.71■■□□□ 1.71
PRPF40BQ6NWY9 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PRPF40BQ6NWY9 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PRPF40BQ6NWY9 AC007375.3-201ENST00000600936 2314 ntBASIC25.71■■□□□ 1.71
PRPF40BQ6NWY9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PRPF40BQ6NWY9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC25.71■■□□□ 1.71
PRPF40BQ6NWY9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC25.71■■□□□ 1.71
PRPF40BQ6NWY9 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.71
PRPF40BQ6NWY9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC25.7■■□□□ 1.71
PRPF40BQ6NWY9 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC25.7■■□□□ 1.71
PRPF40BQ6NWY9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC25.7■■□□□ 1.7
PRPF40BQ6NWY9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
PRPF40BQ6NWY9 AC012618.2-201ENST00000428058 849 ntBASIC25.7■■□□□ 1.7
PRPF40BQ6NWY9 KRT18P21-201ENST00000515767 1272 ntBASIC25.7■■□□□ 1.7
PRPF40BQ6NWY9 REXO2-216ENST00000544196 452 ntTSL 3 BASIC25.7■■□□□ 1.7
PRPF40BQ6NWY9 MAX-217ENST00000557277 728 ntTSL 3 BASIC25.7■■□□□ 1.7
PRPF40BQ6NWY9 AC233702.5-201ENST00000584107 538 ntBASIC25.7■■□□□ 1.7
PRPF40BQ6NWY9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC25.7■■□□□ 1.7
PRPF40BQ6NWY9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PRPF40BQ6NWY9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
PRPF40BQ6NWY9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC25.7■■□□□ 1.7
PRPF40BQ6NWY9 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PRPF40BQ6NWY9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
PRPF40BQ6NWY9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC25.69■■□□□ 1.7
PRPF40BQ6NWY9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC25.69■■□□□ 1.7
PRPF40BQ6NWY9 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PRPF40BQ6NWY9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PRPF40BQ6NWY9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC25.69■■□□□ 1.7
PRPF40BQ6NWY9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PRPF40BQ6NWY9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PRPF40BQ6NWY9 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC25.69■■□□□ 1.7
PRPF40BQ6NWY9 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC25.69■■□□□ 1.7
PRPF40BQ6NWY9 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC25.69■■□□□ 1.7
PRPF40BQ6NWY9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
PRPF40BQ6NWY9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC25.69■■□□□ 1.7
PRPF40BQ6NWY9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PRPF40BQ6NWY9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC25.68■■□□□ 1.7
PRPF40BQ6NWY9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PRPF40BQ6NWY9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PRPF40BQ6NWY9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PRPF40BQ6NWY9 TSPY7P-201ENST00000431358 1114 ntBASIC25.68■■□□□ 1.7
PRPF40BQ6NWY9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC25.68■■□□□ 1.7
PRPF40BQ6NWY9 HES2-205ENST00000487437 968 ntTSL 3 BASIC25.68■■□□□ 1.7
PRPF40BQ6NWY9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC25.68■■□□□ 1.7
PRPF40BQ6NWY9 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC25.68■■□□□ 1.7
PRPF40BQ6NWY9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PRPF40BQ6NWY9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PRPF40BQ6NWY9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC25.68■■□□□ 1.7
PRPF40BQ6NWY9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PRPF40BQ6NWY9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PRPF40BQ6NWY9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PRPF40BQ6NWY9 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
PRPF40BQ6NWY9 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC25.67■■□□□ 1.7
PRPF40BQ6NWY9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PRPF40BQ6NWY9 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PRPF40BQ6NWY9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC25.67■■□□□ 1.7
PRPF40BQ6NWY9 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PRPF40BQ6NWY9 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PRPF40BQ6NWY9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PRPF40BQ6NWY9 RPS2P55-201ENST00000397318 883 ntBASIC25.67■■□□□ 1.7
PRPF40BQ6NWY9 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PRPF40BQ6NWY9 AC007322.3-201ENST00000426526 701 ntBASIC25.67■■□□□ 1.7
PRPF40BQ6NWY9 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC25.67■■□□□ 1.7
PRPF40BQ6NWY9 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC25.67■■□□□ 1.7
PRPF40BQ6NWY9 AC107956.1-201ENST00000494359 873 ntBASIC25.67■■□□□ 1.7
PRPF40BQ6NWY9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC25.67■■□□□ 1.7
PRPF40BQ6NWY9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC25.67■■□□□ 1.7
PRPF40BQ6NWY9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC25.67■■□□□ 1.7
PRPF40BQ6NWY9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
PRPF40BQ6NWY9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC25.67■■□□□ 1.7
PRPF40BQ6NWY9 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PRPF40BQ6NWY9 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
PRPF40BQ6NWY9 CYP21A1P-202ENST00000354927 1481 ntBASIC25.66■■□□□ 1.7
PRPF40BQ6NWY9 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PRPF40BQ6NWY9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC25.66■■□□□ 1.7
PRPF40BQ6NWY9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PRPF40BQ6NWY9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
PRPF40BQ6NWY9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC25.66■■□□□ 1.7
PRPF40BQ6NWY9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
PRPF40BQ6NWY9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
PRPF40BQ6NWY9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC25.66■■□□□ 1.7
PRPF40BQ6NWY9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms