Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
DCAF4L1Q3SXM0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.21■■□□□ 1.15
DCAF4L1Q3SXM0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
DCAF4L1Q3SXM0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
DCAF4L1Q3SXM0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
DCAF4L1Q3SXM0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
DCAF4L1Q3SXM0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
DCAF4L1Q3SXM0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC22.21■■□□□ 1.15
DCAF4L1Q3SXM0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.21■■□□□ 1.15
DCAF4L1Q3SXM0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
DCAF4L1Q3SXM0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
DCAF4L1Q3SXM0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DCAF4L1Q3SXM0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.21■■□□□ 1.15
DCAF4L1Q3SXM0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
DCAF4L1Q3SXM0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
DCAF4L1Q3SXM0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DCAF4L1Q3SXM0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DCAF4L1Q3SXM0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
DCAF4L1Q3SXM0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
DCAF4L1Q3SXM0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.2■■□□□ 1.15
DCAF4L1Q3SXM0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
DCAF4L1Q3SXM0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
DCAF4L1Q3SXM0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.2■■□□□ 1.14
DCAF4L1Q3SXM0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.2■■□□□ 1.14
DCAF4L1Q3SXM0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
DCAF4L1Q3SXM0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC22.2■■□□□ 1.14
DCAF4L1Q3SXM0 POU5F1P3-201ENST00000428824 1078 ntBASIC22.2■■□□□ 1.14
DCAF4L1Q3SXM0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC22.2■■□□□ 1.14
DCAF4L1Q3SXM0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC22.2■■□□□ 1.14
DCAF4L1Q3SXM0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
DCAF4L1Q3SXM0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC22.2■■□□□ 1.14
DCAF4L1Q3SXM0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
DCAF4L1Q3SXM0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
DCAF4L1Q3SXM0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC22.2■■□□□ 1.14
DCAF4L1Q3SXM0 MIR2861-201ENST00000636310 90 ntBASIC22.2■■□□□ 1.14
DCAF4L1Q3SXM0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
DCAF4L1Q3SXM0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
DCAF4L1Q3SXM0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC22.2■■□□□ 1.14
DCAF4L1Q3SXM0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
DCAF4L1Q3SXM0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
DCAF4L1Q3SXM0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
DCAF4L1Q3SXM0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
DCAF4L1Q3SXM0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.19■■□□□ 1.14
DCAF4L1Q3SXM0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DCAF4L1Q3SXM0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
DCAF4L1Q3SXM0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC22.19■■□□□ 1.14
DCAF4L1Q3SXM0 UNC93B5-201ENST00000530315 699 ntBASIC22.19■■□□□ 1.14
DCAF4L1Q3SXM0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC22.19■■□□□ 1.14
DCAF4L1Q3SXM0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.19■■□□□ 1.14
DCAF4L1Q3SXM0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
DCAF4L1Q3SXM0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
DCAF4L1Q3SXM0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
DCAF4L1Q3SXM0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
DCAF4L1Q3SXM0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DCAF4L1Q3SXM0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
DCAF4L1Q3SXM0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
DCAF4L1Q3SXM0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
DCAF4L1Q3SXM0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
DCAF4L1Q3SXM0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.19■■□□□ 1.14
DCAF4L1Q3SXM0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DCAF4L1Q3SXM0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.18■■□□□ 1.14
DCAF4L1Q3SXM0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
DCAF4L1Q3SXM0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
DCAF4L1Q3SXM0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
DCAF4L1Q3SXM0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DCAF4L1Q3SXM0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DCAF4L1Q3SXM0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DCAF4L1Q3SXM0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DCAF4L1Q3SXM0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
DCAF4L1Q3SXM0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DCAF4L1Q3SXM0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
DCAF4L1Q3SXM0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
DCAF4L1Q3SXM0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
DCAF4L1Q3SXM0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
DCAF4L1Q3SXM0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DCAF4L1Q3SXM0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
DCAF4L1Q3SXM0 AC026310.3-201ENST00000625186 2373 ntBASIC22.17■■□□□ 1.14
DCAF4L1Q3SXM0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DCAF4L1Q3SXM0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DCAF4L1Q3SXM0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DCAF4L1Q3SXM0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DCAF4L1Q3SXM0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DCAF4L1Q3SXM0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DCAF4L1Q3SXM0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC22.17■■□□□ 1.14
DCAF4L1Q3SXM0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC22.17■■□□□ 1.14
DCAF4L1Q3SXM0 PNMA6B-201ENST00000538162 1200 ntBASIC22.17■■□□□ 1.14
DCAF4L1Q3SXM0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC22.17■■□□□ 1.14
DCAF4L1Q3SXM0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
DCAF4L1Q3SXM0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22.17■■□□□ 1.14
DCAF4L1Q3SXM0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.17■■□□□ 1.14
DCAF4L1Q3SXM0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DCAF4L1Q3SXM0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
DCAF4L1Q3SXM0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DCAF4L1Q3SXM0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.17■■□□□ 1.14
DCAF4L1Q3SXM0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.16■■□□□ 1.14
DCAF4L1Q3SXM0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DCAF4L1Q3SXM0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
DCAF4L1Q3SXM0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
DCAF4L1Q3SXM0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
DCAF4L1Q3SXM0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms