Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AC105020.6-201ENST00000621523 1217 ntBASIC20.65■□□□□ 0.9
AP1S1P61966 CLDN5-201ENST00000403084 2357 ntBASIC20.65■□□□□ 0.9
AP1S1P61966 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
AP1S1P61966 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
AP1S1P61966 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
AP1S1P61966 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.64■□□□□ 0.9
AP1S1P61966 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
AP1S1P61966 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
AP1S1P61966 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
AP1S1P61966 KRT17P1-201ENST00000399211 1546 ntBASIC20.64■□□□□ 0.9
AP1S1P61966 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.9
AP1S1P61966 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.64■□□□□ 0.89
AP1S1P61966 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
AP1S1P61966 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP1S1P61966 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
AP1S1P61966 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP1S1P61966 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP1S1P61966 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.64■□□□□ 0.89
AP1S1P61966 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
AP1S1P61966 AL355802.2-201ENST00000402069 882 ntBASIC20.64■□□□□ 0.89
AP1S1P61966 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.64■□□□□ 0.89
AP1S1P61966 AL138781.1-201ENST00000566567 1274 ntBASIC20.64■□□□□ 0.89
AP1S1P61966 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.64■□□□□ 0.89
AP1S1P61966 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.64■□□□□ 0.89
AP1S1P61966 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
AP1S1P61966 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.64■□□□□ 0.89
AP1S1P61966 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.64■□□□□ 0.89
AP1S1P61966 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
AP1S1P61966 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.63■□□□□ 0.89
AP1S1P61966 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.63■□□□□ 0.89
AP1S1P61966 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP1S1P61966 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP1S1P61966 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP1S1P61966 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP1S1P61966 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.63■□□□□ 0.89
AP1S1P61966 AC073210.2-201ENST00000430369 194 ntBASIC20.63■□□□□ 0.89
AP1S1P61966 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
AP1S1P61966 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.63■□□□□ 0.89
AP1S1P61966 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.63■□□□□ 0.89
AP1S1P61966 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
AP1S1P61966 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP1S1P61966 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
AP1S1P61966 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
AP1S1P61966 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP1S1P61966 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP1S1P61966 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
AP1S1P61966 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP1S1P61966 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
AP1S1P61966 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.62■□□□□ 0.89
AP1S1P61966 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP1S1P61966 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP1S1P61966 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP1S1P61966 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
AP1S1P61966 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP1S1P61966 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.62■□□□□ 0.89
AP1S1P61966 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.62■□□□□ 0.89
AP1S1P61966 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.62■□□□□ 0.89
AP1S1P61966 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.62■□□□□ 0.89
AP1S1P61966 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP1S1P61966 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
AP1S1P61966 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.62■□□□□ 0.89
AP1S1P61966 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP1S1P61966 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP1S1P61966 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
AP1S1P61966 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.62■□□□□ 0.89
AP1S1P61966 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
AP1S1P61966 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
AP1S1P61966 KRT8P36-201ENST00000489121 1440 ntBASIC20.61■□□□□ 0.89
AP1S1P61966 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.61■□□□□ 0.89
AP1S1P61966 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
AP1S1P61966 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP1S1P61966 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.61■□□□□ 0.89
AP1S1P61966 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP1S1P61966 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.61■□□□□ 0.89
AP1S1P61966 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
AP1S1P61966 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP1S1P61966 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
AP1S1P61966 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
AP1S1P61966 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.61■□□□□ 0.89
AP1S1P61966 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.61■□□□□ 0.89
AP1S1P61966 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
AP1S1P61966 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
AP1S1P61966 AC133041.1-202ENST00000642053 222 ntBASIC20.61■□□□□ 0.89
AP1S1P61966 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP1S1P61966 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.61■□□□□ 0.89
AP1S1P61966 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.61■□□□□ 0.89
AP1S1P61966 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
AP1S1P61966 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP1S1P61966 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP1S1P61966 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
AP1S1P61966 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP1S1P61966 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP1S1P61966 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.6■□□□□ 0.89
AP1S1P61966 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP1S1P61966 AC069152.1-201ENST00000438030 544 ntBASIC20.6■□□□□ 0.89
AP1S1P61966 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
AP1S1P61966 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
AP1S1P61966 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
AP1S1P61966 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP1S1P61966 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms