Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
HIST1H2BDP58876 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
HIST1H2BDP58876 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H2BDP58876 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HIST1H2BDP58876 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H2BDP58876 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H2BDP58876 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H2BDP58876 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC15.49■□□□□ 0.07
HIST1H2BDP58876 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H2BDP58876 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
HIST1H2BDP58876 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H2BDP58876 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.49■□□□□ 0.07
HIST1H2BDP58876 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.49■□□□□ 0.07
HIST1H2BDP58876 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC15.49■□□□□ 0.07
HIST1H2BDP58876 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H2BDP58876 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC15.49■□□□□ 0.07
HIST1H2BDP58876 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC15.49■□□□□ 0.07
HIST1H2BDP58876 DUX4L13-201ENST00000554103 1267 ntBASIC15.49■□□□□ 0.07
HIST1H2BDP58876 DUX4L15-201ENST00000611059 1267 ntBASIC15.49■□□□□ 0.07
HIST1H2BDP58876 DUX4L23-201ENST00000615195 1269 ntBASIC15.49■□□□□ 0.07
HIST1H2BDP58876 DUX4L24-201ENST00000617576 1269 ntBASIC15.49■□□□□ 0.07
HIST1H2BDP58876 DUX4L22-201ENST00000618238 1269 ntBASIC15.49■□□□□ 0.07
HIST1H2BDP58876 DUX4L20-201ENST00000619712 1269 ntBASIC15.49■□□□□ 0.07
HIST1H2BDP58876 DUX4L21-201ENST00000622058 1269 ntBASIC15.49■□□□□ 0.07
HIST1H2BDP58876 DUX4L10-201ENST00000622460 1267 ntBASIC15.49■□□□□ 0.07
HIST1H2BDP58876 AC009086.3-201ENST00000623486 1008 ntBASIC15.49■□□□□ 0.07
HIST1H2BDP58876 DUX4L25-201ENST00000624915 1269 ntBASIC15.49■□□□□ 0.07
HIST1H2BDP58876 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HIST1H2BDP58876 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H2BDP58876 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC15.49■□□□□ 0.07
HIST1H2BDP58876 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H2BDP58876 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H2BDP58876 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.49■□□□□ 0.07
HIST1H2BDP58876 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H2BDP58876 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
HIST1H2BDP58876 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H2BDP58876 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H2BDP58876 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H2BDP58876 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H2BDP58876 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H2BDP58876 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H2BDP58876 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
HIST1H2BDP58876 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H2BDP58876 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H2BDP58876 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H2BDP58876 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
HIST1H2BDP58876 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H2BDP58876 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H2BDP58876 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
HIST1H2BDP58876 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H2BDP58876 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H2BDP58876 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC15.48■□□□□ 0.07
HIST1H2BDP58876 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.48■□□□□ 0.07
HIST1H2BDP58876 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H2BDP58876 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H2BDP58876 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H2BDP58876 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.47■□□□□ 0.07
HIST1H2BDP58876 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2BDP58876 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.47■□□□□ 0.07
HIST1H2BDP58876 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2BDP58876 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
HIST1H2BDP58876 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2BDP58876 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2BDP58876 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2BDP58876 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2BDP58876 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2BDP58876 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.47■□□□□ 0.07
HIST1H2BDP58876 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
HIST1H2BDP58876 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
HIST1H2BDP58876 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2BDP58876 AC009113.1-201ENST00000570267 2443 ntBASIC15.47■□□□□ 0.07
HIST1H2BDP58876 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2BDP58876 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC15.47■□□□□ 0.07
HIST1H2BDP58876 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC15.47■□□□□ 0.07
HIST1H2BDP58876 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2BDP58876 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2BDP58876 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC15.47■□□□□ 0.07
HIST1H2BDP58876 NOC2LP2-201ENST00000407594 1944 ntBASIC15.47■□□□□ 0.07
HIST1H2BDP58876 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2BDP58876 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIST1H2BDP58876 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.46■□□□□ 0.07
HIST1H2BDP58876 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIST1H2BDP58876 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
HIST1H2BDP58876 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIST1H2BDP58876 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.46■□□□□ 0.07
HIST1H2BDP58876 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC15.46■□□□□ 0.07
HIST1H2BDP58876 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIST1H2BDP58876 AL592295.1-201ENST00000400984 884 ntBASIC15.46■□□□□ 0.07
HIST1H2BDP58876 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC15.46■□□□□ 0.07
HIST1H2BDP58876 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIST1H2BDP58876 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HIST1H2BDP58876 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.46■□□□□ 0.07
HIST1H2BDP58876 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
HIST1H2BDP58876 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.46■□□□□ 0.07
HIST1H2BDP58876 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC15.46■□□□□ 0.07
HIST1H2BDP58876 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
HIST1H2BDP58876 FP700111.2-201ENST00000619190 1892 ntBASIC15.46■□□□□ 0.06
HIST1H2BDP58876 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.06
HIST1H2BDP58876 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
HIST1H2BDP58876 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms