Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDH13P55290 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH13P55290 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CDH13P55290 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDH13P55290 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CDH13P55290 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CDH13P55290 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDH13P55290 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CDH13P55290 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.99■□□□□ 0.79
CDH13P55290 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.99■□□□□ 0.79
CDH13P55290 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.99■□□□□ 0.79
CDH13P55290 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH13P55290 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH13P55290 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH13P55290 AC099778.1-201ENST00000568593 1911 ntBASIC19.98■□□□□ 0.79
CDH13P55290 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.98■□□□□ 0.79
CDH13P55290 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDH13P55290 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDH13P55290 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH13P55290 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH13P55290 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.98■□□□□ 0.79
CDH13P55290 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.98■□□□□ 0.79
CDH13P55290 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.98■□□□□ 0.79
CDH13P55290 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.98■□□□□ 0.79
CDH13P55290 TERF1P2-201ENST00000583350 1212 ntBASIC19.98■□□□□ 0.79
CDH13P55290 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.98■□□□□ 0.79
CDH13P55290 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.98■□□□□ 0.79
CDH13P55290 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CDH13P55290 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH13P55290 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH13P55290 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.98■□□□□ 0.79
CDH13P55290 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDH13P55290 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH13P55290 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH13P55290 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH13P55290 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
CDH13P55290 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CDH13P55290 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.97■□□□□ 0.79
CDH13P55290 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH13P55290 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.97■□□□□ 0.79
CDH13P55290 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.97■□□□□ 0.79
CDH13P55290 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.97■□□□□ 0.79
CDH13P55290 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH13P55290 AC123595.1-201ENST00000440769 1046 ntBASIC19.97■□□□□ 0.79
CDH13P55290 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH13P55290 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH13P55290 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
CDH13P55290 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CDH13P55290 AC092720.2-201ENST00000602388 1665 ntBASIC19.97■□□□□ 0.79
CDH13P55290 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CDH13P55290 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
CDH13P55290 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH13P55290 AC116050.2-201ENST00000612102 1779 ntBASIC19.96■□□□□ 0.79
CDH13P55290 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH13P55290 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CDH13P55290 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH13P55290 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.96■□□□□ 0.79
CDH13P55290 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.96■□□□□ 0.79
CDH13P55290 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.96■□□□□ 0.79
CDH13P55290 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.96■□□□□ 0.79
CDH13P55290 CCDC92B-201ENST00000575506 885 ntBASIC19.96■□□□□ 0.79
CDH13P55290 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
CDH13P55290 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH13P55290 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH13P55290 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.96■□□□□ 0.79
CDH13P55290 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.96■□□□□ 0.79
CDH13P55290 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CDH13P55290 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDH13P55290 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH13P55290 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH13P55290 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH13P55290 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH13P55290 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.95■□□□□ 0.78
CDH13P55290 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CDH13P55290 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CDH13P55290 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDH13P55290 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CDH13P55290 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH13P55290 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.95■□□□□ 0.78
CDH13P55290 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.95■□□□□ 0.78
CDH13P55290 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDH13P55290 YBX1P1-201ENST00000445822 960 ntBASIC19.95■□□□□ 0.78
CDH13P55290 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.95■□□□□ 0.78
CDH13P55290 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.95■□□□□ 0.78
CDH13P55290 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.95■□□□□ 0.78
CDH13P55290 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.95■□□□□ 0.78
CDH13P55290 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CDH13P55290 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.95■□□□□ 0.78
CDH13P55290 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDH13P55290 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDH13P55290 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.95■□□□□ 0.78
CDH13P55290 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.95■□□□□ 0.78
CDH13P55290 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.95■□□□□ 0.78
CDH13P55290 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDH13P55290 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH13P55290 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CDH13P55290 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH13P55290 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH13P55290 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH13P55290 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms