Protein–RNA interactions for Protein: P55008

AIF1, Allograft inflammatory factor 1, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AIF1P55008 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AIF1P55008 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
AIF1P55008 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AIF1P55008 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AIF1P55008 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AIF1P55008 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AIF1P55008 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AIF1P55008 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AIF1P55008 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.13■□□□□ 0.97
AIF1P55008 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AIF1P55008 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.13■□□□□ 0.97
AIF1P55008 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
AIF1P55008 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AIF1P55008 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
AIF1P55008 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AIF1P55008 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
AIF1P55008 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.12■□□□□ 0.97
AIF1P55008 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
AIF1P55008 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.12■□□□□ 0.97
AIF1P55008 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.12■□□□□ 0.97
AIF1P55008 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AIF1P55008 CROCCP5-201ENST00000436658 830 ntBASIC21.12■□□□□ 0.97
AIF1P55008 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
AIF1P55008 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.12■□□□□ 0.97
AIF1P55008 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.12■□□□□ 0.97
AIF1P55008 CYP2T3P-201ENST00000601990 817 ntBASIC21.12■□□□□ 0.97
AIF1P55008 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
AIF1P55008 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
AIF1P55008 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.12■□□□□ 0.97
AIF1P55008 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
AIF1P55008 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AIF1P55008 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
AIF1P55008 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AIF1P55008 AC092720.2-201ENST00000602388 1665 ntBASIC21.12■□□□□ 0.97
AIF1P55008 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
AIF1P55008 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
AIF1P55008 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
AIF1P55008 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
AIF1P55008 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
AIF1P55008 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
AIF1P55008 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
AIF1P55008 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
AIF1P55008 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
AIF1P55008 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
AIF1P55008 MIR663A-201ENST00000385250 93 ntBASIC21.11■□□□□ 0.97
AIF1P55008 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.11■□□□□ 0.97
AIF1P55008 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
AIF1P55008 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
AIF1P55008 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.11■□□□□ 0.97
AIF1P55008 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.11■□□□□ 0.97
AIF1P55008 AL050303.2-201ENST00000619798 666 ntBASIC21.11■□□□□ 0.97
AIF1P55008 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
AIF1P55008 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
AIF1P55008 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
AIF1P55008 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
AIF1P55008 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
AIF1P55008 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
AIF1P55008 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
AIF1P55008 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
AIF1P55008 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.1■□□□□ 0.97
AIF1P55008 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
AIF1P55008 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.1■□□□□ 0.97
AIF1P55008 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.1■□□□□ 0.97
AIF1P55008 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
AIF1P55008 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
AIF1P55008 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
AIF1P55008 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
AIF1P55008 AC020907.5-201ENST00000624372 1936 ntBASIC21.1■□□□□ 0.97
AIF1P55008 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
AIF1P55008 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
AIF1P55008 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
AIF1P55008 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
AIF1P55008 KRT18P68-201ENST00000392293 1000 ntBASIC21.1■□□□□ 0.97
AIF1P55008 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.1■□□□□ 0.97
AIF1P55008 AF201337.1-201ENST00000520239 748 ntBASIC21.1■□□□□ 0.97
AIF1P55008 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.1■□□□□ 0.97
AIF1P55008 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.1■□□□□ 0.97
AIF1P55008 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
AIF1P55008 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
AIF1P55008 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.1■□□□□ 0.97
AIF1P55008 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.1■□□□□ 0.97
AIF1P55008 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
AIF1P55008 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.09■□□□□ 0.97
AIF1P55008 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.09■□□□□ 0.97
AIF1P55008 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
AIF1P55008 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
AIF1P55008 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.09■□□□□ 0.97
AIF1P55008 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.09■□□□□ 0.97
AIF1P55008 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.09■□□□□ 0.97
AIF1P55008 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
AIF1P55008 AC105020.6-201ENST00000621523 1217 ntBASIC21.09■□□□□ 0.97
AIF1P55008 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.09■□□□□ 0.97
AIF1P55008 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.09■□□□□ 0.97
AIF1P55008 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.09■□□□□ 0.97
AIF1P55008 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
AIF1P55008 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
AIF1P55008 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
AIF1P55008 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.08■□□□□ 0.97
AIF1P55008 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
AIF1P55008 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms