Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.62■□□□□ 0.89
LIMK2P53671 AP001160.3-201ENST00000601484 763 ntBASIC20.62■□□□□ 0.89
LIMK2P53671 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LIMK2P53671 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LIMK2P53671 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LIMK2P53671 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
LIMK2P53671 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LIMK2P53671 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LIMK2P53671 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LIMK2P53671 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
LIMK2P53671 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LIMK2P53671 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LIMK2P53671 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LIMK2P53671 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
LIMK2P53671 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LIMK2P53671 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.61■□□□□ 0.89
LIMK2P53671 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LIMK2P53671 MIR663A-201ENST00000385250 93 ntBASIC20.61■□□□□ 0.89
LIMK2P53671 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LIMK2P53671 POU5F1P4-201ENST00000413175 1085 ntBASIC20.61■□□□□ 0.89
LIMK2P53671 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.61■□□□□ 0.89
LIMK2P53671 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.61■□□□□ 0.89
LIMK2P53671 UBE2DNL-204ENST00000602536 740 ntBASIC20.61■□□□□ 0.89
LIMK2P53671 AC008175.2-201ENST00000612840 297 ntBASIC20.61■□□□□ 0.89
LIMK2P53671 AL109923.1-201ENST00000618799 583 ntBASIC20.61■□□□□ 0.89
LIMK2P53671 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LIMK2P53671 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LIMK2P53671 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.61■□□□□ 0.89
LIMK2P53671 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
LIMK2P53671 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.61■□□□□ 0.89
LIMK2P53671 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
LIMK2P53671 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LIMK2P53671 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.61■□□□□ 0.89
LIMK2P53671 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LIMK2P53671 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.6■□□□□ 0.89
LIMK2P53671 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LIMK2P53671 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
LIMK2P53671 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LIMK2P53671 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LIMK2P53671 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LIMK2P53671 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
LIMK2P53671 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LIMK2P53671 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.6■□□□□ 0.89
LIMK2P53671 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.6■□□□□ 0.89
LIMK2P53671 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LIMK2P53671 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LIMK2P53671 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
LIMK2P53671 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LIMK2P53671 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LIMK2P53671 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LIMK2P53671 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LIMK2P53671 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LIMK2P53671 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
LIMK2P53671 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LIMK2P53671 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LIMK2P53671 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.59■□□□□ 0.89
LIMK2P53671 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
LIMK2P53671 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.59■□□□□ 0.89
LIMK2P53671 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LIMK2P53671 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.59■□□□□ 0.89
LIMK2P53671 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LIMK2P53671 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LIMK2P53671 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LIMK2P53671 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LIMK2P53671 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
LIMK2P53671 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
LIMK2P53671 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LIMK2P53671 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LIMK2P53671 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
LIMK2P53671 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.59■□□□□ 0.89
LIMK2P53671 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.59■□□□□ 0.89
LIMK2P53671 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.59■□□□□ 0.89
LIMK2P53671 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LIMK2P53671 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
LIMK2P53671 DUX4L16-201ENST00000555130 1264 ntBASIC20.59■□□□□ 0.89
LIMK2P53671 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LIMK2P53671 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.59■□□□□ 0.89
LIMK2P53671 AC231657.2-201ENST00000624556 255 ntBASIC20.59■□□□□ 0.89
LIMK2P53671 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
LIMK2P53671 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LIMK2P53671 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LIMK2P53671 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LIMK2P53671 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LIMK2P53671 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.59■□□□□ 0.89
LIMK2P53671 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LIMK2P53671 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
LIMK2P53671 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LIMK2P53671 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LIMK2P53671 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LIMK2P53671 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
LIMK2P53671 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
LIMK2P53671 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LIMK2P53671 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
LIMK2P53671 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.58■□□□□ 0.89
LIMK2P53671 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LIMK2P53671 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
LIMK2P53671 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LIMK2P53671 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
LIMK2P53671 MYCNOS-205ENST00000641950 531 ntBASIC20.58■□□□□ 0.89
LIMK2P53671 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms