Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF140P52738 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF140P52738 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.42■□□□□ 0.86
ZNF140P52738 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF140P52738 AC005181.1-201ENST00000604782 1256 ntBASIC20.42■□□□□ 0.86
ZNF140P52738 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.42■□□□□ 0.86
ZNF140P52738 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
ZNF140P52738 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.42■□□□□ 0.86
ZNF140P52738 KRT8P36-201ENST00000489121 1440 ntBASIC20.42■□□□□ 0.86
ZNF140P52738 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF140P52738 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF140P52738 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.41■□□□□ 0.86
ZNF140P52738 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF140P52738 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF140P52738 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.41■□□□□ 0.86
ZNF140P52738 LINC01521-201ENST00000504184 1943 ntBASIC20.41■□□□□ 0.86
ZNF140P52738 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ZNF140P52738 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ZNF140P52738 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF140P52738 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF140P52738 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF140P52738 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF140P52738 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.41■□□□□ 0.86
ZNF140P52738 AC092667.1-201ENST00000434301 2586 ntBASIC20.41■□□□□ 0.86
ZNF140P52738 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.41■□□□□ 0.86
ZNF140P52738 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ZNF140P52738 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
ZNF140P52738 AC020907.5-201ENST00000624372 1936 ntBASIC20.41■□□□□ 0.86
ZNF140P52738 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF140P52738 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF140P52738 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.41■□□□□ 0.86
ZNF140P52738 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ZNF140P52738 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF140P52738 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF140P52738 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF140P52738 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF140P52738 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.4■□□□□ 0.86
ZNF140P52738 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF140P52738 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF140P52738 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF140P52738 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.4■□□□□ 0.86
ZNF140P52738 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ZNF140P52738 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.4■□□□□ 0.86
ZNF140P52738 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.4■□□□□ 0.86
ZNF140P52738 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
ZNF140P52738 AC069236.1-201ENST00000604339 616 ntBASIC20.4■□□□□ 0.86
ZNF140P52738 AC100791.3-201ENST00000617619 330 ntBASIC20.4■□□□□ 0.86
ZNF140P52738 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF140P52738 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZNF140P52738 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ZNF140P52738 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZNF140P52738 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.39■□□□□ 0.86
ZNF140P52738 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ZNF140P52738 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
ZNF140P52738 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZNF140P52738 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.39■□□□□ 0.86
ZNF140P52738 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.39■□□□□ 0.85
ZNF140P52738 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF140P52738 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF140P52738 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.39■□□□□ 0.85
ZNF140P52738 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF140P52738 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF140P52738 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
ZNF140P52738 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.39■□□□□ 0.85
ZNF140P52738 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF140P52738 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.39■□□□□ 0.85
ZNF140P52738 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.39■□□□□ 0.85
ZNF140P52738 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF140P52738 AL050303.2-201ENST00000619798 666 ntBASIC20.39■□□□□ 0.85
ZNF140P52738 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF140P52738 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.39■□□□□ 0.85
ZNF140P52738 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.39■□□□□ 0.85
ZNF140P52738 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF140P52738 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.39■□□□□ 0.85
ZNF140P52738 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF140P52738 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.39■□□□□ 0.85
ZNF140P52738 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF140P52738 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF140P52738 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF140P52738 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.38■□□□□ 0.85
ZNF140P52738 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF140P52738 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF140P52738 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF140P52738 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF140P52738 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF140P52738 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF140P52738 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.38■□□□□ 0.85
ZNF140P52738 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF140P52738 AC026185.1-201ENST00000445748 174 ntBASIC20.38■□□□□ 0.85
ZNF140P52738 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF140P52738 OR10C1-204ENST00000622521 1039 ntBASIC20.38■□□□□ 0.85
ZNF140P52738 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF140P52738 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.38■□□□□ 0.85
ZNF140P52738 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF140P52738 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ZNF140P52738 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF140P52738 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF140P52738 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.37■□□□□ 0.85
ZNF140P52738 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF140P52738 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms