Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NEK3P51956 AL355802.2-201ENST00000402069 882 ntBASIC21.06■□□□□ 0.96
NEK3P51956 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.06■□□□□ 0.96
NEK3P51956 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.06■□□□□ 0.96
NEK3P51956 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.06■□□□□ 0.96
NEK3P51956 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.06■□□□□ 0.96
NEK3P51956 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NEK3P51956 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.06■□□□□ 0.96
NEK3P51956 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NEK3P51956 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
NEK3P51956 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.06■□□□□ 0.96
NEK3P51956 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NEK3P51956 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
NEK3P51956 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NEK3P51956 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
NEK3P51956 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.05■□□□□ 0.96
NEK3P51956 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NEK3P51956 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NEK3P51956 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NEK3P51956 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
NEK3P51956 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.05■□□□□ 0.96
NEK3P51956 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NEK3P51956 CYP2T1P-201ENST00000432607 1285 ntBASIC21.05■□□□□ 0.96
NEK3P51956 AC243732.1-201ENST00000612648 864 ntBASIC21.05■□□□□ 0.96
NEK3P51956 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NEK3P51956 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NEK3P51956 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
NEK3P51956 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NEK3P51956 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NEK3P51956 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NEK3P51956 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NEK3P51956 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.05■□□□□ 0.96
NEK3P51956 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NEK3P51956 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
NEK3P51956 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEK3P51956 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEK3P51956 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEK3P51956 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEK3P51956 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEK3P51956 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEK3P51956 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEK3P51956 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEK3P51956 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEK3P51956 TSPY6P-201ENST00000448518 926 ntBASIC21.04■□□□□ 0.96
NEK3P51956 AF201337.1-201ENST00000520239 748 ntBASIC21.04■□□□□ 0.96
NEK3P51956 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.04■□□□□ 0.96
NEK3P51956 AC133552.2-202ENST00000575694 574 ntBASIC21.04■□□□□ 0.96
NEK3P51956 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
NEK3P51956 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEK3P51956 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEK3P51956 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.04■□□□□ 0.96
NEK3P51956 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEK3P51956 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NEK3P51956 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.03■□□□□ 0.96
NEK3P51956 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NEK3P51956 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NEK3P51956 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NEK3P51956 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NEK3P51956 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.03■□□□□ 0.96
NEK3P51956 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.03■□□□□ 0.96
NEK3P51956 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.03■□□□□ 0.96
NEK3P51956 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.03■□□□□ 0.96
NEK3P51956 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.03■□□□□ 0.96
NEK3P51956 AL391422.3-201ENST00000603791 2761 ntBASIC21.03■□□□□ 0.96
NEK3P51956 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NEK3P51956 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.03■□□□□ 0.96
NEK3P51956 AP005212.1-201ENST00000581547 1997 ntBASIC21.03■□□□□ 0.96
NEK3P51956 GABARAPL3-202ENST00000624044 1851 ntBASIC21.03■□□□□ 0.96
NEK3P51956 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NEK3P51956 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.03■□□□□ 0.96
NEK3P51956 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.02■□□□□ 0.96
NEK3P51956 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NEK3P51956 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NEK3P51956 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NEK3P51956 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.02■□□□□ 0.96
NEK3P51956 SLC29A4P1-201ENST00000398760 971 ntBASIC21.02■□□□□ 0.96
NEK3P51956 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
NEK3P51956 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.02■□□□□ 0.96
NEK3P51956 AC105036.2-201ENST00000569468 176 ntBASIC21.02■□□□□ 0.96
NEK3P51956 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
NEK3P51956 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.02■□□□□ 0.96
NEK3P51956 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NEK3P51956 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
NEK3P51956 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
NEK3P51956 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NEK3P51956 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.02■□□□□ 0.96
NEK3P51956 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.02■□□□□ 0.95
NEK3P51956 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NEK3P51956 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.01■□□□□ 0.95
NEK3P51956 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
NEK3P51956 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NEK3P51956 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.01■□□□□ 0.95
NEK3P51956 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NEK3P51956 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NEK3P51956 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NEK3P51956 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NEK3P51956 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.01■□□□□ 0.95
NEK3P51956 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
NEK3P51956 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NEK3P51956 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms