Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAB28P51157 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.8■□□□□ 0.76
RAB28P51157 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.8■□□□□ 0.76
RAB28P51157 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.8■□□□□ 0.76
RAB28P51157 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB28P51157 AC092118.2-201ENST00000613495 667 ntBASIC19.8■□□□□ 0.76
RAB28P51157 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB28P51157 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB28P51157 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB28P51157 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RAB28P51157 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB28P51157 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB28P51157 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RAB28P51157 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB28P51157 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.79■□□□□ 0.76
RAB28P51157 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB28P51157 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
RAB28P51157 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.79■□□□□ 0.76
RAB28P51157 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB28P51157 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB28P51157 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RAB28P51157 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB28P51157 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RAB28P51157 AL138781.1-201ENST00000566567 1274 ntBASIC19.79■□□□□ 0.76
RAB28P51157 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.79■□□□□ 0.76
RAB28P51157 MIR4758-201ENST00000577688 71 ntBASIC19.79■□□□□ 0.76
RAB28P51157 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.79■□□□□ 0.76
RAB28P51157 MIR2861-201ENST00000636310 90 ntBASIC19.79■□□□□ 0.76
RAB28P51157 KRT17P1-201ENST00000399211 1546 ntBASIC19.79■□□□□ 0.76
RAB28P51157 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB28P51157 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RAB28P51157 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB28P51157 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB28P51157 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.79■□□□□ 0.76
RAB28P51157 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB28P51157 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAB28P51157 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB28P51157 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAB28P51157 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RAB28P51157 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB28P51157 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB28P51157 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB28P51157 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB28P51157 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.78■□□□□ 0.76
RAB28P51157 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB28P51157 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.78■□□□□ 0.76
RAB28P51157 AL356652.1-201ENST00000615962 565 ntBASIC19.78■□□□□ 0.76
RAB28P51157 AC105020.6-201ENST00000621523 1217 ntBASIC19.78■□□□□ 0.76
RAB28P51157 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB28P51157 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAB28P51157 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
RAB28P51157 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB28P51157 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB28P51157 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB28P51157 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB28P51157 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB28P51157 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAB28P51157 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.77■□□□□ 0.76
RAB28P51157 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB28P51157 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB28P51157 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.77■□□□□ 0.76
RAB28P51157 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB28P51157 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB28P51157 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.77■□□□□ 0.76
RAB28P51157 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.77■□□□□ 0.76
RAB28P51157 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RAB28P51157 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RAB28P51157 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
RAB28P51157 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.77■□□□□ 0.76
RAB28P51157 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.77■□□□□ 0.76
RAB28P51157 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.77■□□□□ 0.76
RAB28P51157 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
RAB28P51157 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB28P51157 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB28P51157 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB28P51157 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.76■□□□□ 0.75
RAB28P51157 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB28P51157 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB28P51157 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAB28P51157 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.76■□□□□ 0.75
RAB28P51157 AC073210.2-201ENST00000430369 194 ntBASIC19.76■□□□□ 0.75
RAB28P51157 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.76■□□□□ 0.75
RAB28P51157 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.76■□□□□ 0.75
RAB28P51157 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RAB28P51157 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB28P51157 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB28P51157 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAB28P51157 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAB28P51157 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAB28P51157 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
RAB28P51157 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RAB28P51157 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.76■□□□□ 0.75
RAB28P51157 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB28P51157 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.75■□□□□ 0.75
RAB28P51157 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB28P51157 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.75■□□□□ 0.75
RAB28P51157 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB28P51157 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB28P51157 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RAB28P51157 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms