Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CSNK1DP48730 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.6■□□□□ 0.89
CSNK1DP48730 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1DP48730 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1DP48730 DUSP5P2-201ENST00000426873 1033 ntBASIC20.6■□□□□ 0.89
CSNK1DP48730 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.6■□□□□ 0.89
CSNK1DP48730 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.6■□□□□ 0.89
CSNK1DP48730 AC097658.1-201ENST00000475555 843 ntBASIC20.6■□□□□ 0.89
CSNK1DP48730 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.6■□□□□ 0.89
CSNK1DP48730 AC098934.4-201ENST00000564127 592 ntBASIC20.6■□□□□ 0.89
CSNK1DP48730 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.6■□□□□ 0.89
CSNK1DP48730 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1DP48730 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1DP48730 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1DP48730 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.6■□□□□ 0.89
CSNK1DP48730 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CSNK1DP48730 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.6■□□□□ 0.89
CSNK1DP48730 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1DP48730 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1DP48730 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.59■□□□□ 0.89
CSNK1DP48730 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
CSNK1DP48730 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1DP48730 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1DP48730 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1DP48730 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.59■□□□□ 0.89
CSNK1DP48730 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1DP48730 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1DP48730 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CSNK1DP48730 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1DP48730 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1DP48730 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CSNK1DP48730 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CSNK1DP48730 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CSNK1DP48730 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSNK1DP48730 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CSNK1DP48730 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSNK1DP48730 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CSNK1DP48730 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.58■□□□□ 0.89
CSNK1DP48730 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CSNK1DP48730 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.58■□□□□ 0.89
CSNK1DP48730 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.58■□□□□ 0.89
CSNK1DP48730 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.58■□□□□ 0.89
CSNK1DP48730 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.58■□□□□ 0.89
CSNK1DP48730 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.58■□□□□ 0.89
CSNK1DP48730 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.58■□□□□ 0.89
CSNK1DP48730 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CSNK1DP48730 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.58■□□□□ 0.88
CSNK1DP48730 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CSNK1DP48730 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.57■□□□□ 0.88
CSNK1DP48730 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1DP48730 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.57■□□□□ 0.88
CSNK1DP48730 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
CSNK1DP48730 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1DP48730 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.57■□□□□ 0.88
CSNK1DP48730 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.57■□□□□ 0.88
CSNK1DP48730 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.57■□□□□ 0.88
CSNK1DP48730 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1DP48730 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1DP48730 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1DP48730 AC007225.1-201ENST00000566331 1836 ntBASIC20.57■□□□□ 0.88
CSNK1DP48730 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.57■□□□□ 0.88
CSNK1DP48730 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1DP48730 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1DP48730 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1DP48730 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1DP48730 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CSNK1DP48730 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CSNK1DP48730 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.56■□□□□ 0.88
CSNK1DP48730 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.56■□□□□ 0.88
CSNK1DP48730 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1DP48730 C2orf69P4-201ENST00000565394 541 ntBASIC20.56■□□□□ 0.88
CSNK1DP48730 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CSNK1DP48730 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1DP48730 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1DP48730 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
CSNK1DP48730 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1DP48730 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
CSNK1DP48730 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1DP48730 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1DP48730 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.55■□□□□ 0.88
CSNK1DP48730 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1DP48730 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1DP48730 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1DP48730 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1DP48730 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1DP48730 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CSNK1DP48730 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.55■□□□□ 0.88
CSNK1DP48730 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.55■□□□□ 0.88
CSNK1DP48730 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1DP48730 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1DP48730 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1DP48730 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1DP48730 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1DP48730 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1DP48730 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1DP48730 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.54■□□□□ 0.88
CSNK1DP48730 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.54■□□□□ 0.88
CSNK1DP48730 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.54■□□□□ 0.88
CSNK1DP48730 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.54■□□□□ 0.88
CSNK1DP48730 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms