Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC1A3P43003 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.79■□□□□ 0.6
SLC1A3P43003 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC1A3P43003 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.79■□□□□ 0.6
SLC1A3P43003 MYCNOS-205ENST00000641950 531 ntBASIC18.79■□□□□ 0.6
SLC1A3P43003 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC1A3P43003 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC1A3P43003 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SLC1A3P43003 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC1A3P43003 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SLC1A3P43003 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC1A3P43003 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC1A3P43003 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SLC1A3P43003 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC1A3P43003 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC1A3P43003 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC1A3P43003 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC1A3P43003 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC1A3P43003 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC1A3P43003 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC1A3P43003 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC1A3P43003 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.78■□□□□ 0.6
SLC1A3P43003 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC1A3P43003 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC1A3P43003 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.78■□□□□ 0.6
SLC1A3P43003 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.78■□□□□ 0.6
SLC1A3P43003 KRT18P11-201ENST00000435214 1283 ntBASIC18.78■□□□□ 0.6
SLC1A3P43003 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
SLC1A3P43003 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC1A3P43003 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC1A3P43003 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC1A3P43003 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SLC1A3P43003 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC1A3P43003 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC1A3P43003 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC1A3P43003 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC1A3P43003 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC1A3P43003 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC1A3P43003 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC1A3P43003 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SLC1A3P43003 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
SLC1A3P43003 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC1A3P43003 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC1A3P43003 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC1A3P43003 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC1A3P43003 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC1A3P43003 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC1A3P43003 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC1A3P43003 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC1A3P43003 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SLC1A3P43003 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.77■□□□□ 0.6
SLC1A3P43003 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC1A3P43003 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC1A3P43003 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.77■□□□□ 0.6
SLC1A3P43003 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC1A3P43003 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC1A3P43003 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC1A3P43003 AC116050.2-201ENST00000612102 1779 ntBASIC18.77■□□□□ 0.6
SLC1A3P43003 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
SLC1A3P43003 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SLC1A3P43003 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC1A3P43003 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SLC1A3P43003 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC1A3P43003 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
SLC1A3P43003 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC1A3P43003 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC1A3P43003 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A3P43003 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A3P43003 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A3P43003 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC1A3P43003 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A3P43003 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC1A3P43003 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SLC1A3P43003 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC1A3P43003 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC1A3P43003 AC137761.2-201ENST00000561729 223 ntBASIC18.76■□□□□ 0.59
SLC1A3P43003 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC1A3P43003 AC145350.3-201ENST00000569033 163 ntBASIC18.76■□□□□ 0.59
SLC1A3P43003 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC1A3P43003 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A3P43003 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A3P43003 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SLC1A3P43003 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A3P43003 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A3P43003 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A3P43003 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A3P43003 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SLC1A3P43003 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
SLC1A3P43003 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A3P43003 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC1A3P43003 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SLC1A3P43003 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC1A3P43003 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SLC1A3P43003 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC1A3P43003 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC1A3P43003 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC1A3P43003 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC1A3P43003 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC1A3P43003 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.75■□□□□ 0.59
SLC1A3P43003 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms