Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC3P40938 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC3P40938 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC3P40938 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC3P40938 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.72■□□□□ 0.59
RFC3P40938 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.72■□□□□ 0.59
RFC3P40938 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFC3P40938 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFC3P40938 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFC3P40938 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
RFC3P40938 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC3P40938 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC3P40938 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC3P40938 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC3P40938 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC3P40938 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC3P40938 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RFC3P40938 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFC3P40938 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFC3P40938 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.72■□□□□ 0.59
RFC3P40938 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RFC3P40938 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC3P40938 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC3P40938 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC3P40938 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC3P40938 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RFC3P40938 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.71■□□□□ 0.59
RFC3P40938 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC3P40938 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RFC3P40938 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFC3P40938 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC3P40938 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC3P40938 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RFC3P40938 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.71■□□□□ 0.59
RFC3P40938 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.71■□□□□ 0.59
RFC3P40938 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.71■□□□□ 0.59
RFC3P40938 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.71■□□□□ 0.59
RFC3P40938 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RFC3P40938 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.71■□□□□ 0.59
RFC3P40938 ITM2C-210ENST00000620962 501 ntBASIC18.71■□□□□ 0.59
RFC3P40938 AC066615.1-201ENST00000640911 628 ntBASIC18.71■□□□□ 0.59
RFC3P40938 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
RFC3P40938 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
RFC3P40938 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC3P40938 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC3P40938 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC3P40938 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC3P40938 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.71■□□□□ 0.59
RFC3P40938 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.7■□□□□ 0.58
RFC3P40938 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.7■□□□□ 0.58
RFC3P40938 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFC3P40938 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFC3P40938 PRORSD1P-201ENST00000295112 541 ntBASIC18.7■□□□□ 0.58
RFC3P40938 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFC3P40938 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.7■□□□□ 0.58
RFC3P40938 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.7■□□□□ 0.58
RFC3P40938 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.7■□□□□ 0.58
RFC3P40938 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.7■□□□□ 0.58
RFC3P40938 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.7■□□□□ 0.58
RFC3P40938 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.7■□□□□ 0.58
RFC3P40938 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFC3P40938 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFC3P40938 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFC3P40938 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RFC3P40938 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFC3P40938 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFC3P40938 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFC3P40938 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.7■□□□□ 0.58
RFC3P40938 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC3P40938 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFC3P40938 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RFC3P40938 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC3P40938 AC244015.2-201ENST00000616358 1861 ntBASIC18.69■□□□□ 0.58
RFC3P40938 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC3P40938 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC3P40938 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC3P40938 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFC3P40938 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC3P40938 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC3P40938 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFC3P40938 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.69■□□□□ 0.58
RFC3P40938 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC3P40938 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.69■□□□□ 0.58
RFC3P40938 AC006058.3-201ENST00000606217 1069 ntBASIC18.69■□□□□ 0.58
RFC3P40938 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RFC3P40938 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC3P40938 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.69■□□□□ 0.58
RFC3P40938 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFC3P40938 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.69■□□□□ 0.58
RFC3P40938 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.69■□□□□ 0.58
RFC3P40938 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.69■□□□□ 0.58
RFC3P40938 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC3P40938 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.69■□□□□ 0.58
RFC3P40938 Z98882.1-201ENST00000622160 2253 ntBASIC18.69■□□□□ 0.58
RFC3P40938 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFC3P40938 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RFC3P40938 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFC3P40938 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFC3P40938 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RFC3P40938 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms