Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 YLR456WYLR456W 615 nt2.93□□□□□ -1.94
SSM4P40318 LSM2YBL026W 288 nt2.93□□□□□ -1.94
SSM4P40318 NSL1YPL233W 651 nt2.93□□□□□ -1.94
SSM4P40318 REV3YPL167C 4515 nt2.92□□□□□ -1.94
SSM4P40318 RGA2YDR379W 3030 nt2.92□□□□□ -1.94
SSM4P40318 BRE1YDL074C 2103 nt2.92□□□□□ -1.94
SSM4P40318 TSA2YDR453C 591 nt2.92□□□□□ -1.94
SSM4P40318 YER038W-AYER038W-A 381 nt2.92□□□□□ -1.94
SSM4P40318 MPO1YGL010W 525 nt2.92□□□□□ -1.94
SSM4P40318 YGR290WYGR290W 444 nt2.92□□□□□ -1.94
SSM4P40318 TIM10YHR005C-A 282 nt2.92□□□□□ -1.94
SSM4P40318 VPS20YMR077C 666 nt2.92□□□□□ -1.94
SSM4P40318 TOA1YOR194C 861 nt2.92□□□□□ -1.94
SSM4P40318 YIL166CYIL166C 1629 nt2.91□□□□□ -1.94
SSM4P40318 SNU56YDR240C 1479 nt2.91□□□□□ -1.94
SSM4P40318 YIL080WYIL080W 4722 nt2.91□□□□□ -1.94
SSM4P40318 MMS1YPR164W 4224 nt2.91□□□□□ -1.94
SSM4P40318 snR76snR76 109 nt2.91□□□□□ -1.94
SSM4P40318 HNT1YDL125C 477 nt2.91□□□□□ -1.94
SSM4P40318 YER189WYER189W 369 nt2.91□□□□□ -1.94
SSM4P40318 LAG1YHL003C 1236 nt2.91□□□□□ -1.94
SSM4P40318 RGM1YMR182C 636 nt2.91□□□□□ -1.94
SSM4P40318 YNL122CYNL122C 348 nt2.91□□□□□ -1.94
SSM4P40318 ATP19YOL077W-A 207 nt2.91□□□□□ -1.94
SSM4P40318 MSS18YPR134W 807 nt2.91□□□□□ -1.94
SSM4P40318 YBL005W-BYBL005W-B 5268 nt2.9□□□□□ -1.94
SSM4P40318 AMS1YGL156W 3252 nt2.9□□□□□ -1.94
SSM4P40318 GEA1YJR031C 4227 nt2.9□□□□□ -1.95
SSM4P40318 GLC7YER133W 939 nt2.9□□□□□ -1.95
SSM4P40318 SWM2YNR004W 441 nt2.9□□□□□ -1.95
SSM4P40318 SVS1YPL163C 783 nt2.9□□□□□ -1.95
SSM4P40318 MGM1YOR211C 2646 nt2.89□□□□□ -1.95
SSM4P40318 RAD6YGL058W 519 nt2.89□□□□□ -1.95
SSM4P40318 YGR045CYGR045C 363 nt2.89□□□□□ -1.95
SSM4P40318 RTS3YGR161C 792 nt2.89□□□□□ -1.95
SSM4P40318 YLR255CYLR255C 354 nt2.89□□□□□ -1.95
SSM4P40318 YNL146C-AYNL146C-A 195 nt2.89□□□□□ -1.95
SSM4P40318 GAL7YBR018C 1101 nt2.89□□□□□ -1.95
SSM4P40318 GCV2YMR189W 3105 nt2.89□□□□□ -1.95
SSM4P40318 TPS2YDR074W 2691 nt2.88□□□□□ -1.95
SSM4P40318 GPI17YDR434W 1605 nt2.88□□□□□ -1.95
SSM4P40318 YNL034WYNL034W 1839 nt2.88□□□□□ -1.95
SSM4P40318 SDC25YLL016W 3147 nt2.88□□□□□ -1.95
SSM4P40318 RPL27BYDR471W 411 nt2.88□□□□□ -1.95
SSM4P40318 RPL9AYGL147C 576 nt2.88□□□□□ -1.95
SSM4P40318 MRPL44YMR225C 297 nt2.88□□□□□ -1.95
SSM4P40318 COQ10YOL008W 624 nt2.88□□□□□ -1.95
SSM4P40318 YPL080CYPL080C 327 nt2.88□□□□□ -1.95
SSM4P40318 RGL1YPL066W 1440 nt2.86□□□□□ -1.95
SSM4P40318 SPC1YJR010C-A 285 nt2.86□□□□□ -1.95
SSM4P40318 YKR051WYKR051W 1257 nt2.86□□□□□ -1.95
SSM4P40318 ECM25YJL201W 1800 nt2.86□□□□□ -1.95
SSM4P40318 PSO2YMR137C 1986 nt2.85□□□□□ -1.95
SSM4P40318 SCH9YHR205W 2475 nt2.85□□□□□ -1.95
SSM4P40318 YER172C-AYER172C-A 381 nt2.85□□□□□ -1.95
SSM4P40318 CMS1YLR003C 876 nt2.85□□□□□ -1.95
SSM4P40318 RNP1YLL046C 750 nt2.84□□□□□ -1.96
SSM4P40318 BNR1YIL159W 4128 nt2.83□□□□□ -1.96
SSM4P40318 RTR2YDR066C 591 nt2.83□□□□□ -1.96
SSM4P40318 YDR209CYDR209C 414 nt2.83□□□□□ -1.96
SSM4P40318 YAL042C-AYAL042C-A 378 nt2.83□□□□□ -1.96
SSM4P40318 YLR230WYLR230W 306 nt2.83□□□□□ -1.96
SSM4P40318 RPL36AYMR194W 303 nt2.83□□□□□ -1.96
SSM4P40318 RPB11YOL005C 363 nt2.83□□□□□ -1.96
SSM4P40318 PET123YOR158W 957 nt2.83□□□□□ -1.96
SSM4P40318 ECM5YMR176W 4236 nt2.83□□□□□ -1.96
SSM4P40318 DPB11YJL090C 2295 nt2.82□□□□□ -1.96
SSM4P40318 YAP3YHL009C 993 nt2.82□□□□□ -1.96
SSM4P40318 RPL16AYIL133C 600 nt2.82□□□□□ -1.96
SSM4P40318 PEP8YJL053W 1140 nt2.82□□□□□ -1.96
SSM4P40318 YJR023CYJR023C 402 nt2.82□□□□□ -1.96
SSM4P40318 TRM7YBR061C 933 nt2.82□□□□□ -1.96
SSM4P40318 NDD1YOR372C 1665 nt2.81□□□□□ -1.96
SSM4P40318 YEL030C-AYEL030C-A 315 nt2.81□□□□□ -1.96
SSM4P40318 MXR1YER042W 555 nt2.81□□□□□ -1.96
SSM4P40318 TPM2YIL138C 486 nt2.81□□□□□ -1.96
SSM4P40318 FYV7YLR068W 456 nt2.81□□□□□ -1.96
SSM4P40318 CRS5YOR031W 210 nt2.81□□□□□ -1.96
SSM4P40318 YPL039WYPL039W 951 nt2.81□□□□□ -1.96
SSM4P40318 HER1YOR227W 3741 nt2.8□□□□□ -1.96
SSM4P40318 SHE9YDR393W 1371 nt2.8□□□□□ -1.96
SSM4P40318 MDM32YOR147W 1869 nt2.8□□□□□ -1.96
SSM4P40318 YIL058WYIL058W 285 nt2.8□□□□□ -1.96
SSM4P40318 YJL202CYJL202C 348 nt2.8□□□□□ -1.96
SSM4P40318 VPH2YKL119C 648 nt2.8□□□□□ -1.96
SSM4P40318 YOL134CYOL134C 390 nt2.8□□□□□ -1.96
SSM4P40318 BAS1YKR099W 2436 nt2.8□□□□□ -1.96
SSM4P40318 UTP13YLR222C 2454 nt2.8□□□□□ -1.96
SSM4P40318 BRR2YER172C 6492 nt2.79□□□□□ -1.96
SSM4P40318 ASG1YIL130W 2895 nt2.79□□□□□ -1.96
SSM4P40318 YCR108CYCR108C 192 nt2.79□□□□□ -1.96
SSM4P40318 YDR220CYDR220C 294 nt2.79□□□□□ -1.96
SSM4P40318 PBI2YNL015W 228 nt2.79□□□□□ -1.96
SSM4P40318 YOR032W-AYOR032W-A 201 nt2.79□□□□□ -1.96
SSM4P40318 LEU3YLR451W 2661 nt2.78□□□□□ -1.96
SSM4P40318 KAP123YER110C 3342 nt2.78□□□□□ -1.96
SSM4P40318 GPI8YDR331W 1236 nt2.78□□□□□ -1.96
SSM4P40318 IRC4YDR540C 540 nt2.78□□□□□ -1.96
SSM4P40318 YGL024WYGL024W 336 nt2.78□□□□□ -1.96
SSM4P40318 RNR4YGR180C 1038 nt2.78□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 17.1 ms