Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.68■□□□□ 0.26
CEACAM3P40198 CDCA4P2-201ENST00000441182 718 ntBASIC16.68■□□□□ 0.26
CEACAM3P40198 AC006970.2-201ENST00000450065 779 ntBASIC16.68■□□□□ 0.26
CEACAM3P40198 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
CEACAM3P40198 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.68■□□□□ 0.26
CEACAM3P40198 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CEACAM3P40198 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CEACAM3P40198 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CEACAM3P40198 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CEACAM3P40198 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CEACAM3P40198 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.68■□□□□ 0.26
CEACAM3P40198 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CEACAM3P40198 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.68■□□□□ 0.26
CEACAM3P40198 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CEACAM3P40198 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CEACAM3P40198 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CEACAM3P40198 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CEACAM3P40198 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CEACAM3P40198 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CEACAM3P40198 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CEACAM3P40198 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
CEACAM3P40198 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CEACAM3P40198 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CEACAM3P40198 CYP2T1P-201ENST00000432607 1285 ntBASIC16.67■□□□□ 0.26
CEACAM3P40198 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CEACAM3P40198 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.67■□□□□ 0.26
CEACAM3P40198 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CEACAM3P40198 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CEACAM3P40198 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.67■□□□□ 0.26
CEACAM3P40198 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CEACAM3P40198 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.67■□□□□ 0.26
CEACAM3P40198 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CEACAM3P40198 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.67■□□□□ 0.26
CEACAM3P40198 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CEACAM3P40198 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.67■□□□□ 0.26
CEACAM3P40198 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.67■□□□□ 0.26
CEACAM3P40198 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CEACAM3P40198 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CEACAM3P40198 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CEACAM3P40198 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CEACAM3P40198 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CEACAM3P40198 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CEACAM3P40198 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CEACAM3P40198 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CEACAM3P40198 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.66■□□□□ 0.26
CEACAM3P40198 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CEACAM3P40198 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CEACAM3P40198 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CEACAM3P40198 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
CEACAM3P40198 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CEACAM3P40198 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.66■□□□□ 0.26
CEACAM3P40198 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.66■□□□□ 0.26
CEACAM3P40198 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CEACAM3P40198 RARRES2P4-201ENST00000514074 484 ntBASIC16.66■□□□□ 0.26
CEACAM3P40198 AC005229.4-201ENST00000610085 2198 ntBASIC16.66■□□□□ 0.26
CEACAM3P40198 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.66■□□□□ 0.26
CEACAM3P40198 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CEACAM3P40198 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CEACAM3P40198 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CEACAM3P40198 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CEACAM3P40198 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CEACAM3P40198 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CEACAM3P40198 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.66■□□□□ 0.26
CEACAM3P40198 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.66■□□□□ 0.26
CEACAM3P40198 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.65■□□□□ 0.26
CEACAM3P40198 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CEACAM3P40198 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CEACAM3P40198 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CEACAM3P40198 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.65■□□□□ 0.26
CEACAM3P40198 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.65■□□□□ 0.26
CEACAM3P40198 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CEACAM3P40198 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.65■□□□□ 0.26
CEACAM3P40198 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CEACAM3P40198 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.65■□□□□ 0.26
CEACAM3P40198 AC100791.3-201ENST00000617619 330 ntBASIC16.65■□□□□ 0.26
CEACAM3P40198 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.65■□□□□ 0.26
CEACAM3P40198 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CEACAM3P40198 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CEACAM3P40198 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CEACAM3P40198 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.65■□□□□ 0.26
CEACAM3P40198 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CEACAM3P40198 AC006128.1-201ENST00000624704 1661 ntBASIC16.65■□□□□ 0.26
CEACAM3P40198 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CEACAM3P40198 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CEACAM3P40198 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
CEACAM3P40198 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CEACAM3P40198 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CEACAM3P40198 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CEACAM3P40198 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CEACAM3P40198 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.64■□□□□ 0.25
CEACAM3P40198 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CEACAM3P40198 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CEACAM3P40198 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.64■□□□□ 0.25
CEACAM3P40198 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CEACAM3P40198 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CEACAM3P40198 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CEACAM3P40198 MIR663A-201ENST00000385250 93 ntBASIC16.64■□□□□ 0.25
CEACAM3P40198 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CEACAM3P40198 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.64■□□□□ 0.25
CEACAM3P40198 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms