Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 RPS21BYJL136C 264 nt3.11□□□□□ -1.91
TDP1P38319 SMA2YML066C 1110 nt3.11□□□□□ -1.91
TDP1P38319 YCK3YER123W 1575 nt3.11□□□□□ -1.91
TDP1P38319 YDR034C-DYDR034C-D 5313 nt3.11□□□□□ -1.91
TDP1P38319 YKL100CYKL100C 1764 nt3.1□□□□□ -1.91
TDP1P38319 IRC10YOL015W 1761 nt3.1□□□□□ -1.91
TDP1P38319 CDC36YDL165W 576 nt3.1□□□□□ -1.91
TDP1P38319 YDR193WYDR193W 399 nt3.1□□□□□ -1.91
TDP1P38319 ATP8Q0080 147 nt3.1□□□□□ -1.91
TDP1P38319 HYR1YIR037W 492 nt3.1□□□□□ -1.91
TDP1P38319 snR51snR51 107 nt3.1□□□□□ -1.91
TDP1P38319 ARK1YNL020C 1917 nt3.1□□□□□ -1.91
TDP1P38319 DIA2YOR080W 2199 nt3.1□□□□□ -1.91
TDP1P38319 YHR080CYHR080C 4038 nt3.09□□□□□ -1.91
TDP1P38319 RPL29YFR032C-A 180 nt3.09□□□□□ -1.91
TDP1P38319 YFR056CYFR056C 369 nt3.09□□□□□ -1.91
TDP1P38319 YJL222W-BYJL222W-B 138 nt3.09□□□□□ -1.91
TDP1P38319 RPL9BYNL067W 576 nt3.09□□□□□ -1.91
TDP1P38319 RPB11YOL005C 363 nt3.09□□□□□ -1.91
TDP1P38319 IRC23YOR044W 474 nt3.09□□□□□ -1.91
TDP1P38319 YPL229WYPL229W 621 nt3.09□□□□□ -1.91
TDP1P38319 TIM12YBR091C 330 nt3.09□□□□□ -1.91
TDP1P38319 SWD3YBR175W 948 nt3.09□□□□□ -1.91
TDP1P38319 YLR001CYLR001C 2589 nt3.09□□□□□ -1.91
TDP1P38319 KIN82YCR091W 2163 nt3.09□□□□□ -1.91
TDP1P38319 MAK21YDR060W 3078 nt3.09□□□□□ -1.91
TDP1P38319 SLP1YOR154W 1764 nt3.09□□□□□ -1.91
TDP1P38319 FUN30YAL019W 3396 nt3.09□□□□□ -1.92
TDP1P38319 YSW1YBR148W 1830 nt3.08□□□□□ -1.92
TDP1P38319 YDR169C-AYDR169C-A 150 nt3.08□□□□□ -1.92
TDP1P38319 DYN2YDR424C 279 nt3.08□□□□□ -1.92
TDP1P38319 YBL073WYBL073W 312 nt3.08□□□□□ -1.92
TDP1P38319 ATP22YDR350C 2055 nt3.08□□□□□ -1.92
TDP1P38319 MET5YJR137C 4329 nt3.07□□□□□ -1.92
TDP1P38319 ROM1YGR070W 3468 nt3.07□□□□□ -1.92
TDP1P38319 RPC10YHR143W-A 213 nt3.07□□□□□ -1.92
TDP1P38319 PAU14YIL176C 363 nt3.07□□□□□ -1.92
TDP1P38319 PAU1YJL223C 363 nt3.07□□□□□ -1.92
TDP1P38319 IOC3YFR013W 2364 nt3.07□□□□□ -1.92
TDP1P38319 SNX41YDR425W 1878 nt3.06□□□□□ -1.92
TDP1P38319 YER188C-AYER188C-A 300 nt3.06□□□□□ -1.92
TDP1P38319 RAD6YGL058W 519 nt3.06□□□□□ -1.92
TDP1P38319 BAT1YHR208W 1182 nt3.06□□□□□ -1.92
TDP1P38319 PFD1YJL179W 330 nt3.06□□□□□ -1.92
TDP1P38319 BUD4YJR092W 4344 nt3.06□□□□□ -1.92
TDP1P38319 CHS2YBR038W 2892 nt3.06□□□□□ -1.92
TDP1P38319 YBR085C-AYBR085C-A 258 nt3.06□□□□□ -1.92
TDP1P38319 CCT7YJL111W 1653 nt3.05□□□□□ -1.92
TDP1P38319 BIT61YJL058C 1632 nt3.05□□□□□ -1.92
TDP1P38319 ISD11YER048W-A 285 nt3.05□□□□□ -1.92
TDP1P38319 YJL182CYJL182C 318 nt3.05□□□□□ -1.92
TDP1P38319 RPL37AYLR185W 267 nt3.05□□□□□ -1.92
TDP1P38319 DNM1YLL001W 2274 nt3.05□□□□□ -1.92
TDP1P38319 MDM32YOR147W 1869 nt3.05□□□□□ -1.92
TDP1P38319 DPB11YJL090C 2295 nt3.04□□□□□ -1.92
TDP1P38319 FAA2YER015W 2235 nt3.04□□□□□ -1.92
TDP1P38319 NOP4YPL043W 2058 nt3.04□□□□□ -1.92
TDP1P38319 tC(GCA)BtC(GCA)B 72 nt3.04□□□□□ -1.92
TDP1P38319 tC(GCA)GtC(GCA)G 72 nt3.04□□□□□ -1.92
TDP1P38319 tC(GCA)P1tC(GCA)P1 72 nt3.04□□□□□ -1.92
TDP1P38319 tC(GCA)P2tC(GCA)P2 72 nt3.04□□□□□ -1.92
TDP1P38319 URM1YIL008W 300 nt3.04□□□□□ -1.92
TDP1P38319 YJR023CYJR023C 402 nt3.04□□□□□ -1.92
TDP1P38319 YJR140W-AYJR140W-A 150 nt3.04□□□□□ -1.92
TDP1P38319 YKL111CYKL111C 336 nt3.04□□□□□ -1.92
TDP1P38319 YLR458WYLR458W 381 nt3.04□□□□□ -1.92
TDP1P38319 YMR307C-AYMR307C-A 195 nt3.04□□□□□ -1.92
TDP1P38319 HEM4YOR278W 828 nt3.04□□□□□ -1.92
TDP1P38319 ALY1YKR021W 2748 nt3.04□□□□□ -1.92
TDP1P38319 PAC1YOR269W 1485 nt3.03□□□□□ -1.92
TDP1P38319 MES1YGR264C 2256 nt3.03□□□□□ -1.92
TDP1P38319 EXO84YBR102C 2262 nt3.03□□□□□ -1.92
TDP1P38319 CDH1YGL003C 1701 nt3.03□□□□□ -1.92
TDP1P38319 IRC4YDR540C 540 nt3.03□□□□□ -1.92
TDP1P38319 COX23YHR116W 456 nt3.03□□□□□ -1.92
TDP1P38319 PAU23YLR037C 375 nt3.03□□□□□ -1.92
TDP1P38319 RPL20BYOR312C 519 nt3.03□□□□□ -1.92
TDP1P38319 YCL023CYCL023C 348 nt3.03□□□□□ -1.92
TDP1P38319 TOM70YNL121C 1854 nt3.03□□□□□ -1.93
TDP1P38319 ENA5YDR038C 3276 nt3.02□□□□□ -1.93
TDP1P38319 YDR210W-BYDR210W-B 5313 nt3.02□□□□□ -1.93
TDP1P38319 YDR261W-BYDR261W-B 5313 nt3.02□□□□□ -1.93
TDP1P38319 YFL002W-AYFL002W-A 5313 nt3.02□□□□□ -1.93
TDP1P38319 YGR161W-BYGR161W-B 5313 nt3.02□□□□□ -1.93
TDP1P38319 YLR410W-BYLR410W-B 5313 nt3.02□□□□□ -1.93
TDP1P38319 YCL019WYCL019W 5313 nt3.02□□□□□ -1.93
TDP1P38319 MET10YFR030W 3108 nt3.02□□□□□ -1.93
TDP1P38319 TFB1YDR311W 1929 nt3.02□□□□□ -1.93
TDP1P38319 YGL149WYGL149W 306 nt3.02□□□□□ -1.93
TDP1P38319 APQ12YIL040W 417 nt3.02□□□□□ -1.93
TDP1P38319 PHD1YKL043W 1101 nt3.02□□□□□ -1.93
TDP1P38319 YLR466C-BYLR466C-B 117 nt3.02□□□□□ -1.93
TDP1P38319 EGD1YPL037C 474 nt3.02□□□□□ -1.93
TDP1P38319 BCH1YMR237W 2175 nt3.02□□□□□ -1.93
TDP1P38319 TSC11YER093C 4293 nt3.02□□□□□ -1.93
TDP1P38319 GCD6YDR211W 2139 nt3.02□□□□□ -1.93
TDP1P38319 TLC1TLC1 1301 nt3.01□□□□□ -1.93
TDP1P38319 WIP1YDR374W-A 270 nt3.01□□□□□ -1.93
TDP1P38319 PSY1YKL076C 384 nt3.01□□□□□ -1.93
TDP1P38319 YMR122W-AYMR122W-A 255 nt3.01□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 19.6 ms