Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NCK1P16333 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCK1P16333 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NCK1P16333 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCK1P16333 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCK1P16333 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.3■□□□□ 0.68
NCK1P16333 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.3■□□□□ 0.68
NCK1P16333 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCK1P16333 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
NCK1P16333 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCK1P16333 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NCK1P16333 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCK1P16333 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
NCK1P16333 IGHV3-19-201ENST00000521488 291 ntBASIC19.3■□□□□ 0.68
NCK1P16333 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.3■□□□□ 0.68
NCK1P16333 AC233992.3-201ENST00000607491 485 ntBASIC19.3■□□□□ 0.68
NCK1P16333 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCK1P16333 AL158211.5-201ENST00000623583 2518 ntBASIC19.3■□□□□ 0.68
NCK1P16333 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCK1P16333 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NCK1P16333 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NCK1P16333 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCK1P16333 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NCK1P16333 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCK1P16333 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NCK1P16333 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.29■□□□□ 0.68
NCK1P16333 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NCK1P16333 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
NCK1P16333 AC125437.2-201ENST00000625180 2167 ntBASIC19.29■□□□□ 0.68
NCK1P16333 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCK1P16333 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCK1P16333 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.29■□□□□ 0.68
NCK1P16333 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
NCK1P16333 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.29■□□□□ 0.68
NCK1P16333 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NCK1P16333 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.29■□□□□ 0.68
NCK1P16333 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.29■□□□□ 0.68
NCK1P16333 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCK1P16333 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
NCK1P16333 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCK1P16333 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCK1P16333 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.28■□□□□ 0.68
NCK1P16333 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCK1P16333 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCK1P16333 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NCK1P16333 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCK1P16333 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NCK1P16333 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCK1P16333 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCK1P16333 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NCK1P16333 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NCK1P16333 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.28■□□□□ 0.68
NCK1P16333 AC105233.4-201ENST00000642045 216 ntBASIC19.28■□□□□ 0.68
NCK1P16333 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
NCK1P16333 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCK1P16333 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCK1P16333 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCK1P16333 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NCK1P16333 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCK1P16333 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NCK1P16333 AP004607.4-201ENST00000530158 1459 ntBASIC19.28■□□□□ 0.68
NCK1P16333 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCK1P16333 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NCK1P16333 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NCK1P16333 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCK1P16333 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
NCK1P16333 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.27■□□□□ 0.68
NCK1P16333 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.27■□□□□ 0.68
NCK1P16333 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
NCK1P16333 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NCK1P16333 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NCK1P16333 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCK1P16333 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
NCK1P16333 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
NCK1P16333 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCK1P16333 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.27■□□□□ 0.68
NCK1P16333 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NCK1P16333 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.27■□□□□ 0.68
NCK1P16333 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCK1P16333 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NCK1P16333 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NCK1P16333 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NCK1P16333 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.27■□□□□ 0.67
NCK1P16333 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.27■□□□□ 0.67
NCK1P16333 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NCK1P16333 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.26■□□□□ 0.67
NCK1P16333 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NCK1P16333 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
NCK1P16333 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCK1P16333 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.26■□□□□ 0.67
NCK1P16333 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCK1P16333 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.26■□□□□ 0.67
NCK1P16333 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NCK1P16333 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.26■□□□□ 0.67
NCK1P16333 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
NCK1P16333 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NCK1P16333 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCK1P16333 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NCK1P16333 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCK1P16333 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms