Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 AC005829.2-201ENST00000571422 1056 ntBASIC20.84■□□□□ 0.93
CHRNB1P11230 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.84■□□□□ 0.93
CHRNB1P11230 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.84■□□□□ 0.93
CHRNB1P11230 AC110285.5-201ENST00000611501 352 ntBASIC20.84■□□□□ 0.93
CHRNB1P11230 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CHRNB1P11230 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNB1P11230 AC087633.2-202ENST00000565166 1439 ntBASIC20.84■□□□□ 0.93
CHRNB1P11230 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.84■□□□□ 0.93
CHRNB1P11230 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.84■□□□□ 0.93
CHRNB1P11230 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNB1P11230 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNB1P11230 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNB1P11230 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.83■□□□□ 0.93
CHRNB1P11230 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHRNB1P11230 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CHRNB1P11230 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHRNB1P11230 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CHRNB1P11230 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CHRNB1P11230 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CHRNB1P11230 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.83■□□□□ 0.93
CHRNB1P11230 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.83■□□□□ 0.93
CHRNB1P11230 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.83■□□□□ 0.93
CHRNB1P11230 AL135905.2-201ENST00000584934 1404 ntBASIC20.83■□□□□ 0.93
CHRNB1P11230 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
CHRNB1P11230 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CHRNB1P11230 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.82■□□□□ 0.92
CHRNB1P11230 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHRNB1P11230 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHRNB1P11230 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRNB1P11230 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHRNB1P11230 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CHRNB1P11230 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHRNB1P11230 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.82■□□□□ 0.92
CHRNB1P11230 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.82■□□□□ 0.92
CHRNB1P11230 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.82■□□□□ 0.92
CHRNB1P11230 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.82■□□□□ 0.92
CHRNB1P11230 MIR4785-201ENST00000585005 73 ntBASIC20.82■□□□□ 0.92
CHRNB1P11230 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHRNB1P11230 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRNB1P11230 AC006557.6-201ENST00000623071 864 ntBASIC20.82■□□□□ 0.92
CHRNB1P11230 AC113410.3-201ENST00000623366 203 ntBASIC20.82■□□□□ 0.92
CHRNB1P11230 AC133561.5-201ENST00000635547 218 ntBASIC20.82■□□□□ 0.92
CHRNB1P11230 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
CHRNB1P11230 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHRNB1P11230 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.82■□□□□ 0.92
CHRNB1P11230 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CHRNB1P11230 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CHRNB1P11230 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CHRNB1P11230 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.81■□□□□ 0.92
CHRNB1P11230 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
CHRNB1P11230 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.81■□□□□ 0.92
CHRNB1P11230 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.81■□□□□ 0.92
CHRNB1P11230 KRASP1-201ENST00000407852 552 ntBASIC20.81■□□□□ 0.92
CHRNB1P11230 AC087499.1-201ENST00000418141 1075 ntBASIC20.81■□□□□ 0.92
CHRNB1P11230 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHRNB1P11230 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.81■□□□□ 0.92
CHRNB1P11230 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHRNB1P11230 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.81■□□□□ 0.92
CHRNB1P11230 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.81■□□□□ 0.92
CHRNB1P11230 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.81■□□□□ 0.92
CHRNB1P11230 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.81■□□□□ 0.92
CHRNB1P11230 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRNB1P11230 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHRNB1P11230 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.81■□□□□ 0.92
CHRNB1P11230 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRNB1P11230 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRNB1P11230 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CHRNB1P11230 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNB1P11230 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CHRNB1P11230 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNB1P11230 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNB1P11230 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNB1P11230 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNB1P11230 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.8■□□□□ 0.92
CHRNB1P11230 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.8■□□□□ 0.92
CHRNB1P11230 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNB1P11230 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNB1P11230 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNB1P11230 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.8■□□□□ 0.92
CHRNB1P11230 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNB1P11230 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNB1P11230 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.8■□□□□ 0.92
CHRNB1P11230 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CHRNB1P11230 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRNB1P11230 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.79■□□□□ 0.92
CHRNB1P11230 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHRNB1P11230 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHRNB1P11230 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHRNB1P11230 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CHRNB1P11230 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHRNB1P11230 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.79■□□□□ 0.92
CHRNB1P11230 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHRNB1P11230 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.79■□□□□ 0.92
CHRNB1P11230 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.79■□□□□ 0.92
CHRNB1P11230 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CHRNB1P11230 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.79■□□□□ 0.92
CHRNB1P11230 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CHRNB1P11230 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHRNB1P11230 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHRNB1P11230 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms