Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 PEP12YOR036W 867 nt1.17□□□□□ -2.22
RPL40BP0CH09 IRR1YIL026C 3453 nt1.17□□□□□ -2.22
RPL40BP0CH09 HKR1YDR420W 5409 nt1.17□□□□□ -2.22
RPL40BP0CH09 DAL5YJR152W 1632 nt1.16□□□□□ -2.22
RPL40BP0CH09 YOR019WYOR019W 2193 nt1.16□□□□□ -2.22
RPL40BP0CH09 RIC1YLR039C 3171 nt1.16□□□□□ -2.22
RPL40BP0CH09 RPL37BYDR500C 267 nt1.16□□□□□ -2.22
RPL40BP0CH09 YFR054CYFR054C 579 nt1.16□□□□□ -2.22
RPL40BP0CH09 EST3YIL009C-A 546 nt1.16□□□□□ -2.22
RPL40BP0CH09 YIR023C-AYIR023C-A 324 nt1.16□□□□□ -2.22
RPL40BP0CH09 RIF2YLR453C 1188 nt1.16□□□□□ -2.22
RPL40BP0CH09 POP8YBL018C 402 nt1.16□□□□□ -2.22
RPL40BP0CH09 YNL089CYNL089C 477 nt1.16□□□□□ -2.22
RPL40BP0CH09 GRX7YBR014C 612 nt1.16□□□□□ -2.22
RPL40BP0CH09 BFR1YOR198C 1413 nt1.15□□□□□ -2.22
RPL40BP0CH09 YOR343W-BYOR343W-B 5313 nt1.15□□□□□ -2.22
RPL40BP0CH09 YDL211CYDL211C 1119 nt1.15□□□□□ -2.23
RPL40BP0CH09 NSE3YDR288W 912 nt1.15□□□□□ -2.23
RPL40BP0CH09 MMS21YEL019C 804 nt1.15□□□□□ -2.23
RPL40BP0CH09 MER1YNL210W 813 nt1.15□□□□□ -2.23
RPL40BP0CH09 YCL001W-AYCL001W-A 462 nt1.15□□□□□ -2.23
RPL40BP0CH09 YCL046WYCL046W 324 nt1.15□□□□□ -2.23
RPL40BP0CH09 SEC63YOR254C 1992 nt1.15□□□□□ -2.23
RPL40BP0CH09 LEU3YLR451W 2661 nt1.14□□□□□ -2.23
RPL40BP0CH09 GRR1YJR090C 3456 nt1.14□□□□□ -2.23
RPL40BP0CH09 YCR087C-AYCR087C-A 462 nt1.14□□□□□ -2.23
RPL40BP0CH09 YDR018CYDR018C 1191 nt1.14□□□□□ -2.23
RPL40BP0CH09 GPI2YPL076W 843 nt1.14□□□□□ -2.23
RPL40BP0CH09 YBR292CYBR292C 372 nt1.14□□□□□ -2.23
RPL40BP0CH09 CDC53YDL132W 2448 nt1.14□□□□□ -2.23
RPL40BP0CH09 YPD1YDL235C 504 nt1.13□□□□□ -2.23
RPL40BP0CH09 FMP16YDR070C 282 nt1.13□□□□□ -2.23
RPL40BP0CH09 WIP1YDR374W-A 270 nt1.13□□□□□ -2.23
RPL40BP0CH09 DUO1YGL061C 744 nt1.13□□□□□ -2.23
RPL40BP0CH09 YMR230W-AYMR230W-A 189 nt1.13□□□□□ -2.23
RPL40BP0CH09 NTC20YBR188C 423 nt1.13□□□□□ -2.23
RPL40BP0CH09 YDR341CYDR341C 1824 nt1.12□□□□□ -2.23
RPL40BP0CH09 APL3YBL037W 3078 nt1.12□□□□□ -2.23
RPL40BP0CH09 ESC2YDR363W 1371 nt1.12□□□□□ -2.23
RPL40BP0CH09 YGL118CYGL118C 438 nt1.12□□□□□ -2.23
RPL40BP0CH09 OST5YGL226C-A 261 nt1.12□□□□□ -2.23
RPL40BP0CH09 YJL133C-AYJL133C-A 225 nt1.12□□□□□ -2.23
RPL40BP0CH09 MSA2YKR077W 1092 nt1.12□□□□□ -2.23
RPL40BP0CH09 ATX2YOR079C 942 nt1.12□□□□□ -2.23
RPL40BP0CH09 YGR109W-BYGR109W-B 4644 nt1.12□□□□□ -2.23
RPL40BP0CH09 PBP4YDL053C 558 nt1.11□□□□□ -2.23
RPL40BP0CH09 YGL039WYGL039W 1047 nt1.11□□□□□ -2.23
RPL40BP0CH09 YGR109W-AYGR109W-A 873 nt1.11□□□□□ -2.23
RPL40BP0CH09 MVB12YGR206W 306 nt1.11□□□□□ -2.23
RPL40BP0CH09 ATG38YLR211C 681 nt1.11□□□□□ -2.23
RPL40BP0CH09 UBC7YMR022W 498 nt1.11□□□□□ -2.23
RPL40BP0CH09 BAG7YOR134W 1230 nt1.11□□□□□ -2.23
RPL40BP0CH09 SPC29YPL124W 762 nt1.11□□□□□ -2.23
RPL40BP0CH09 SPO24YPR036W-A 204 nt1.11□□□□□ -2.23
RPL40BP0CH09 LDH1YBR204C 1128 nt1.11□□□□□ -2.23
RPL40BP0CH09 PRK1YIL095W 2433 nt1.1□□□□□ -2.23
RPL40BP0CH09 MNE1YOR350C 1992 nt1.1□□□□□ -2.23
RPL40BP0CH09 CDC36YDL165W 576 nt1.1□□□□□ -2.23
RPL40BP0CH09 TDA10YGR205W 873 nt1.1□□□□□ -2.23
RPL40BP0CH09 YKL145W-AYKL145W-A 93 nt1.1□□□□□ -2.23
RPL40BP0CH09 YLR053CYLR053C 327 nt1.1□□□□□ -2.23
RPL40BP0CH09 DLT1YMR126C 1029 nt1.1□□□□□ -2.23
RPL40BP0CH09 RRT16YNL105W 429 nt1.1□□□□□ -2.23
RPL40BP0CH09 RPL33BYOR234C 324 nt1.1□□□□□ -2.23
RPL40BP0CH09 YPL238CYPL238C 390 nt1.1□□□□□ -2.23
RPL40BP0CH09 TAZ1YPR140W 1146 nt1.1□□□□□ -2.23
RPL40BP0CH09 YPR142CYPR142C 564 nt1.1□□□□□ -2.23
RPL40BP0CH09 GCD2YGR083C 1956 nt1.1□□□□□ -2.23
RPL40BP0CH09 YIL059CYIL059C 366 nt1.09□□□□□ -2.23
RPL40BP0CH09 HHT2YNL031C 411 nt1.09□□□□□ -2.23
RPL40BP0CH09 YBL083CYBL083C 426 nt1.09□□□□□ -2.23
RPL40BP0CH09 SUT2YPR009W 807 nt1.09□□□□□ -2.23
RPL40BP0CH09 COG8YML071C 1824 nt1.09□□□□□ -2.23
RPL40BP0CH09 RAD18YCR066W 1464 nt1.09□□□□□ -2.24
RPL40BP0CH09 YBR012W-AYBR012W-A 1323 nt1.09□□□□□ -2.24
RPL40BP0CH09 YOR142W-AYOR142W-A 1323 nt1.09□□□□□ -2.24
RPL40BP0CH09 YPR158W-AYPR158W-A 1323 nt1.09□□□□□ -2.24
RPL40BP0CH09 PAF1YBR279W 1338 nt1.09□□□□□ -2.24
RPL40BP0CH09 SPO22YIL073C 2928 nt1.09□□□□□ -2.24
RPL40BP0CH09 HSE1YHL002W 1359 nt1.08□□□□□ -2.24
RPL40BP0CH09 YJL049WYJL049W 1353 nt1.08□□□□□ -2.24
RPL40BP0CH09 ARP9YMR033W 1404 nt1.08□□□□□ -2.24
RPL40BP0CH09 YDR381C-AYDR381C-A 345 nt1.08□□□□□ -2.24
RPL40BP0CH09 YER147C-AYER147C-A 411 nt1.08□□□□□ -2.24
RPL40BP0CH09 YGR283CYGR283C 1026 nt1.08□□□□□ -2.24
RPL40BP0CH09 YIL142C-AYIL142C-A 333 nt1.08□□□□□ -2.24
RPL40BP0CH09 TEN1YLR010C 483 nt1.08□□□□□ -2.24
RPL40BP0CH09 SMD3YLR147C 306 nt1.08□□□□□ -2.24
RPL40BP0CH09 YMR052C-AYMR052C-A 366 nt1.08□□□□□ -2.24
RPL40BP0CH09 TOA1YOR194C 861 nt1.08□□□□□ -2.24
RPL40BP0CH09 RVS161YCR009C 798 nt1.07□□□□□ -2.24
RPL40BP0CH09 CDC50YCR094W 1176 nt1.07□□□□□ -2.24
RPL40BP0CH09 CRD1YDL142C 852 nt1.07□□□□□ -2.24
RPL40BP0CH09 RPS26BYER131W 360 nt1.07□□□□□ -2.24
RPL40BP0CH09 SNC1YAL030W 354 nt1.07□□□□□ -2.24
RPL40BP0CH09 YMR178WYMR178W 825 nt1.07□□□□□ -2.24
RPL40BP0CH09 SPP381YBR152W 876 nt1.07□□□□□ -2.24
RPL40BP0CH09 PIG2YIL045W 1617 nt1.07□□□□□ -2.24
RPL40BP0CH09 YMR160WYMR160W 2451 nt1.07□□□□□ -2.24
RPL40BP0CH09 SEC21YNL287W 2808 nt1.07□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 33.7 ms