Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.79■□□□□ 0.92
HLA-DQB2P05538 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.79■□□□□ 0.92
HLA-DQB2P05538 AC026185.1-201ENST00000445748 174 ntBASIC20.79■□□□□ 0.92
HLA-DQB2P05538 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.79■□□□□ 0.92
HLA-DQB2P05538 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HLA-DQB2P05538 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.79■□□□□ 0.92
HLA-DQB2P05538 AL050303.2-201ENST00000619798 666 ntBASIC20.79■□□□□ 0.92
HLA-DQB2P05538 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.79■□□□□ 0.92
HLA-DQB2P05538 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.79■□□□□ 0.92
HLA-DQB2P05538 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HLA-DQB2P05538 CYP21A1P-202ENST00000354927 1481 ntBASIC20.79■□□□□ 0.92
HLA-DQB2P05538 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
HLA-DQB2P05538 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.79■□□□□ 0.92
HLA-DQB2P05538 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HLA-DQB2P05538 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.78■□□□□ 0.92
HLA-DQB2P05538 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DQB2P05538 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DQB2P05538 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DQB2P05538 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DQB2P05538 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DQB2P05538 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.78■□□□□ 0.92
HLA-DQB2P05538 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DQB2P05538 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DQB2P05538 AP005212.1-201ENST00000581547 1997 ntBASIC20.78■□□□□ 0.92
HLA-DQB2P05538 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.78■□□□□ 0.92
HLA-DQB2P05538 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DQB2P05538 MIR663A-201ENST00000385250 93 ntBASIC20.78■□□□□ 0.92
HLA-DQB2P05538 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
HLA-DQB2P05538 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DQB2P05538 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.78■□□□□ 0.92
HLA-DQB2P05538 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.78■□□□□ 0.92
HLA-DQB2P05538 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.78■□□□□ 0.92
HLA-DQB2P05538 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.78■□□□□ 0.92
HLA-DQB2P05538 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DQB2P05538 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DQB2P05538 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DQB2P05538 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
HLA-DQB2P05538 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DQB2P05538 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.78■□□□□ 0.92
HLA-DQB2P05538 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DQB2P05538 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DQB2P05538 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DQB2P05538 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.78■□□□□ 0.92
HLA-DQB2P05538 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.77■□□□□ 0.92
HLA-DQB2P05538 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.77■□□□□ 0.92
HLA-DQB2P05538 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DQB2P05538 AC092667.1-201ENST00000434301 2586 ntBASIC20.77■□□□□ 0.92
HLA-DQB2P05538 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DQB2P05538 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.77■□□□□ 0.92
HLA-DQB2P05538 CROCCP5-201ENST00000436658 830 ntBASIC20.77■□□□□ 0.92
HLA-DQB2P05538 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DQB2P05538 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.77■□□□□ 0.92
HLA-DQB2P05538 AC069236.1-201ENST00000604339 616 ntBASIC20.77■□□□□ 0.92
HLA-DQB2P05538 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DQB2P05538 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DQB2P05538 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
HLA-DQB2P05538 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DQB2P05538 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.77■□□□□ 0.92
HLA-DQB2P05538 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DQB2P05538 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DQB2P05538 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
HLA-DQB2P05538 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.76■□□□□ 0.91
HLA-DQB2P05538 LINC01006-201ENST00000333319 2292 ntBASIC20.76■□□□□ 0.91
HLA-DQB2P05538 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DQB2P05538 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.76■□□□□ 0.91
HLA-DQB2P05538 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DQB2P05538 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
HLA-DQB2P05538 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
HLA-DQB2P05538 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
HLA-DQB2P05538 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DQB2P05538 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DQB2P05538 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DQB2P05538 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DQB2P05538 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DQB2P05538 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DQB2P05538 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
HLA-DQB2P05538 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DQB2P05538 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
HLA-DQB2P05538 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
HLA-DQB2P05538 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
HLA-DQB2P05538 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DQB2P05538 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DQB2P05538 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
HLA-DQB2P05538 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DQB2P05538 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.76■□□□□ 0.91
HLA-DQB2P05538 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.76■□□□□ 0.91
HLA-DQB2P05538 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DQB2P05538 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
HLA-DQB2P05538 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DQB2P05538 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.75■□□□□ 0.91
HLA-DQB2P05538 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.75■□□□□ 0.91
HLA-DQB2P05538 AC093787.1-201ENST00000450396 207 ntBASIC20.75■□□□□ 0.91
HLA-DQB2P05538 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
HLA-DQB2P05538 AC008694.1-202ENST00000636953 945 ntBASIC20.75■□□□□ 0.91
HLA-DQB2P05538 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.75■□□□□ 0.91
HLA-DQB2P05538 AC087633.2-202ENST00000565166 1439 ntBASIC20.75■□□□□ 0.91
HLA-DQB2P05538 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.75■□□□□ 0.91
HLA-DQB2P05538 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DQB2P05538 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-DQB2P05538 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 272.5 ms