Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.92■■□□□ 1.26
PGK1P00558 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.92■■□□□ 1.26
PGK1P00558 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.92■■□□□ 1.26
PGK1P00558 AL135905.2-201ENST00000584934 1404 ntBASIC22.91■■□□□ 1.26
PGK1P00558 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PGK1P00558 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.91■■□□□ 1.26
PGK1P00558 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PGK1P00558 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC22.91■■□□□ 1.26
PGK1P00558 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PGK1P00558 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.91■■□□□ 1.26
PGK1P00558 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PGK1P00558 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
PGK1P00558 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PGK1P00558 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC22.91■■□□□ 1.26
PGK1P00558 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC22.91■■□□□ 1.26
PGK1P00558 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC22.91■■□□□ 1.26
PGK1P00558 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
PGK1P00558 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
PGK1P00558 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
PGK1P00558 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PGK1P00558 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PGK1P00558 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PGK1P00558 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
PGK1P00558 MOK-233ENST00000524214 1539 ntTSL 2 BASIC22.91■■□□□ 1.26
PGK1P00558 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PGK1P00558 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PGK1P00558 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PGK1P00558 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC22.91■■□□□ 1.26
PGK1P00558 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
PGK1P00558 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
PGK1P00558 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
PGK1P00558 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
PGK1P00558 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PGK1P00558 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PGK1P00558 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
PGK1P00558 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PGK1P00558 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PGK1P00558 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PGK1P00558 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.9■■□□□ 1.26
PGK1P00558 PRKY-204ENST00000533551 1019 ntBASIC22.9■■□□□ 1.26
PGK1P00558 AL355075.4-201ENST00000554988 638 ntBASIC22.9■■□□□ 1.26
PGK1P00558 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
PGK1P00558 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.9■■□□□ 1.26
PGK1P00558 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PGK1P00558 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PGK1P00558 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PGK1P00558 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PGK1P00558 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PGK1P00558 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
PGK1P00558 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.89■■□□□ 1.26
PGK1P00558 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PGK1P00558 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
PGK1P00558 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
PGK1P00558 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.89■■□□□ 1.26
PGK1P00558 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC22.89■■□□□ 1.25
PGK1P00558 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PGK1P00558 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC22.89■■□□□ 1.25
PGK1P00558 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PGK1P00558 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC22.89■■□□□ 1.25
PGK1P00558 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC22.89■■□□□ 1.25
PGK1P00558 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC22.89■■□□□ 1.25
PGK1P00558 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PGK1P00558 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.89■■□□□ 1.25
PGK1P00558 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PGK1P00558 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.89■■□□□ 1.25
PGK1P00558 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PGK1P00558 AC133561.1-201ENST00000568600 2415 ntBASIC22.88■■□□□ 1.25
PGK1P00558 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
PGK1P00558 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
PGK1P00558 AL390719.1-204ENST00000412397 1219 ntBASIC22.88■■□□□ 1.25
PGK1P00558 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC22.88■■□□□ 1.25
PGK1P00558 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.88■■□□□ 1.25
PGK1P00558 PENK-204ENST00000518770 863 ntTSL 2 BASIC22.88■■□□□ 1.25
PGK1P00558 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.88■■□□□ 1.25
PGK1P00558 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PGK1P00558 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC22.88■■□□□ 1.25
PGK1P00558 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.88■■□□□ 1.25
PGK1P00558 AL356652.1-201ENST00000615962 565 ntBASIC22.88■■□□□ 1.25
PGK1P00558 CABP2-204ENST00000636477 941 ntTSL 5 BASIC22.88■■□□□ 1.25
PGK1P00558 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.88■■□□□ 1.25
PGK1P00558 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.88■■□□□ 1.25
PGK1P00558 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.88■■□□□ 1.25
PGK1P00558 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PGK1P00558 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PGK1P00558 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.88■■□□□ 1.25
PGK1P00558 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.88■■□□□ 1.25
PGK1P00558 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PGK1P00558 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
PGK1P00558 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PGK1P00558 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PGK1P00558 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC22.87■■□□□ 1.25
PGK1P00558 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PGK1P00558 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.87■■□□□ 1.25
PGK1P00558 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.87■■□□□ 1.25
PGK1P00558 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
PGK1P00558 PGM5P4-201ENST00000421970 445 ntBASIC22.87■■□□□ 1.25
PGK1P00558 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC22.87■■□□□ 1.25
PGK1P00558 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PGK1P00558 RARRES2P10-201ENST00000564312 460 ntBASIC22.87■■□□□ 1.25
PGK1P00558 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms