Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX4O95219 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
SNX4O95219 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX4O95219 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX4O95219 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.16■□□□□ 0.66
SNX4O95219 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX4O95219 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX4O95219 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.16■□□□□ 0.66
SNX4O95219 RAP2CP1-201ENST00000605103 478 ntBASIC19.16■□□□□ 0.66
SNX4O95219 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX4O95219 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX4O95219 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX4O95219 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.16■□□□□ 0.66
SNX4O95219 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX4O95219 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
SNX4O95219 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX4O95219 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX4O95219 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
SNX4O95219 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNX4O95219 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNX4O95219 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX4O95219 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.15■□□□□ 0.66
SNX4O95219 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNX4O95219 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX4O95219 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.15■□□□□ 0.66
SNX4O95219 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.15■□□□□ 0.66
SNX4O95219 TERF1P5-201ENST00000477545 1207 ntBASIC19.15■□□□□ 0.66
SNX4O95219 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNX4O95219 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNX4O95219 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNX4O95219 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.15■□□□□ 0.66
SNX4O95219 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.15■□□□□ 0.66
SNX4O95219 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX4O95219 AF106564.1-201ENST00000607058 2553 ntBASIC19.15■□□□□ 0.66
SNX4O95219 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.15■□□□□ 0.66
SNX4O95219 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX4O95219 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
SNX4O95219 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.14■□□□□ 0.66
SNX4O95219 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.14■□□□□ 0.66
SNX4O95219 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX4O95219 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.14■□□□□ 0.65
SNX4O95219 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.14■□□□□ 0.65
SNX4O95219 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX4O95219 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX4O95219 AC007322.1-201ENST00000426983 750 ntBASIC19.14■□□□□ 0.65
SNX4O95219 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SNX4O95219 AC013268.1-206ENST00000638368 961 ntBASIC19.14■□□□□ 0.65
SNX4O95219 AC112229.1-201ENST00000639295 961 ntBASIC19.14■□□□□ 0.65
SNX4O95219 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
SNX4O95219 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX4O95219 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SNX4O95219 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.14■□□□□ 0.65
SNX4O95219 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.14■□□□□ 0.65
SNX4O95219 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX4O95219 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.14■□□□□ 0.65
SNX4O95219 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNX4O95219 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX4O95219 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNX4O95219 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
SNX4O95219 FEM1AP4-201ENST00000443167 1987 ntBASIC19.13■□□□□ 0.65
SNX4O95219 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SNX4O95219 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX4O95219 LINC01006-201ENST00000333319 2292 ntBASIC19.13■□□□□ 0.65
SNX4O95219 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX4O95219 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX4O95219 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.13■□□□□ 0.65
SNX4O95219 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNX4O95219 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.13■□□□□ 0.65
SNX4O95219 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.13■□□□□ 0.65
SNX4O95219 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.13■□□□□ 0.65
SNX4O95219 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX4O95219 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNX4O95219 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SNX4O95219 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX4O95219 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
SNX4O95219 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX4O95219 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SNX4O95219 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SNX4O95219 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX4O95219 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX4O95219 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX4O95219 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.12■□□□□ 0.65
SNX4O95219 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX4O95219 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX4O95219 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
SNX4O95219 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNX4O95219 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX4O95219 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNX4O95219 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SNX4O95219 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX4O95219 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.12■□□□□ 0.65
SNX4O95219 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX4O95219 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SNX4O95219 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.12■□□□□ 0.65
SNX4O95219 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.12■□□□□ 0.65
SNX4O95219 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.12■□□□□ 0.65
SNX4O95219 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.12■□□□□ 0.65
SNX4O95219 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.12■□□□□ 0.65
SNX4O95219 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.12■□□□□ 0.65
SNX4O95219 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms