Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 KRT8P36-201ENST00000489121 1440 ntBASIC18.92■□□□□ 0.62
NKX2-2O95096 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-2O95096 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.92■□□□□ 0.62
NKX2-2O95096 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-2O95096 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-2O95096 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-2O95096 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.92■□□□□ 0.62
NKX2-2O95096 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.92■□□□□ 0.62
NKX2-2O95096 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.92■□□□□ 0.62
NKX2-2O95096 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.92■□□□□ 0.62
NKX2-2O95096 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.92■□□□□ 0.62
NKX2-2O95096 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-2O95096 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.92■□□□□ 0.62
NKX2-2O95096 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.92■□□□□ 0.62
NKX2-2O95096 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-2O95096 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.92■□□□□ 0.62
NKX2-2O95096 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-2O95096 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-2O95096 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-2O95096 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.92■□□□□ 0.62
NKX2-2O95096 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NKX2-2O95096 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX2-2O95096 CYP21A1P-202ENST00000354927 1481 ntBASIC18.91■□□□□ 0.62
NKX2-2O95096 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NKX2-2O95096 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
NKX2-2O95096 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX2-2O95096 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
NKX2-2O95096 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NKX2-2O95096 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX2-2O95096 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX2-2O95096 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NKX2-2O95096 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX2-2O95096 AC004911.1-201ENST00000416316 871 ntBASIC18.91■□□□□ 0.62
NKX2-2O95096 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.91■□□□□ 0.62
NKX2-2O95096 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.91■□□□□ 0.62
NKX2-2O95096 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.91■□□□□ 0.62
NKX2-2O95096 AL137784.2-201ENST00000607332 1000 ntBASIC18.91■□□□□ 0.62
NKX2-2O95096 AC080038.1-201ENST00000611274 1154 ntBASIC18.91■□□□□ 0.62
NKX2-2O95096 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.91■□□□□ 0.62
NKX2-2O95096 AC100791.3-201ENST00000617619 330 ntBASIC18.91■□□□□ 0.62
NKX2-2O95096 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.91■□□□□ 0.62
NKX2-2O95096 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX2-2O95096 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.91■□□□□ 0.62
NKX2-2O95096 AC087633.2-202ENST00000565166 1439 ntBASIC18.91■□□□□ 0.62
NKX2-2O95096 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
NKX2-2O95096 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-2O95096 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-2O95096 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
NKX2-2O95096 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-2O95096 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NKX2-2O95096 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NKX2-2O95096 AC092720.2-201ENST00000602388 1665 ntBASIC18.9■□□□□ 0.62
NKX2-2O95096 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NKX2-2O95096 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-2O95096 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
NKX2-2O95096 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.9■□□□□ 0.62
NKX2-2O95096 CYP2T1P-201ENST00000432607 1285 ntBASIC18.9■□□□□ 0.62
NKX2-2O95096 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.9■□□□□ 0.62
NKX2-2O95096 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
NKX2-2O95096 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-2O95096 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NKX2-2O95096 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.9■□□□□ 0.62
NKX2-2O95096 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.9■□□□□ 0.62
NKX2-2O95096 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NKX2-2O95096 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.9■□□□□ 0.62
NKX2-2O95096 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-2O95096 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-2O95096 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-2O95096 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.9■□□□□ 0.62
NKX2-2O95096 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-2O95096 AC092667.1-201ENST00000434301 2586 ntBASIC18.89■□□□□ 0.62
NKX2-2O95096 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
NKX2-2O95096 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.89■□□□□ 0.61
NKX2-2O95096 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.89■□□□□ 0.61
NKX2-2O95096 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NKX2-2O95096 PGM5P4-201ENST00000421970 445 ntBASIC18.89■□□□□ 0.61
NKX2-2O95096 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.89■□□□□ 0.61
NKX2-2O95096 AC073111.5-205ENST00000641717 521 ntBASIC18.89■□□□□ 0.61
NKX2-2O95096 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NKX2-2O95096 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NKX2-2O95096 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.89■□□□□ 0.61
NKX2-2O95096 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NKX2-2O95096 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.89■□□□□ 0.61
NKX2-2O95096 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
NKX2-2O95096 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.89■□□□□ 0.61
NKX2-2O95096 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NKX2-2O95096 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX2-2O95096 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX2-2O95096 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX2-2O95096 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
NKX2-2O95096 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX2-2O95096 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NKX2-2O95096 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
NKX2-2O95096 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.88■□□□□ 0.61
NKX2-2O95096 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX2-2O95096 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.88■□□□□ 0.61
NKX2-2O95096 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.88■□□□□ 0.61
NKX2-2O95096 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NKX2-2O95096 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.88■□□□□ 0.61
NKX2-2O95096 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms