Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE3O75131 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.61■□□□□ 0.73
CPNE3O75131 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
CPNE3O75131 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.61■□□□□ 0.73
CPNE3O75131 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.61■□□□□ 0.73
CPNE3O75131 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.61■□□□□ 0.73
CPNE3O75131 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.61■□□□□ 0.73
CPNE3O75131 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.61■□□□□ 0.73
CPNE3O75131 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CPNE3O75131 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.61■□□□□ 0.73
CPNE3O75131 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.61■□□□□ 0.73
CPNE3O75131 ITM2C-210ENST00000620962 501 ntBASIC19.61■□□□□ 0.73
CPNE3O75131 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.61■□□□□ 0.73
CPNE3O75131 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE3O75131 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CPNE3O75131 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.61■□□□□ 0.73
CPNE3O75131 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE3O75131 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE3O75131 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.61■□□□□ 0.73
CPNE3O75131 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE3O75131 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE3O75131 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.61■□□□□ 0.73
CPNE3O75131 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.61■□□□□ 0.73
CPNE3O75131 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE3O75131 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE3O75131 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE3O75131 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE3O75131 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.6■□□□□ 0.73
CPNE3O75131 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE3O75131 KRT18P29-201ENST00000397031 1267 ntBASIC19.6■□□□□ 0.73
CPNE3O75131 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.6■□□□□ 0.73
CPNE3O75131 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.6■□□□□ 0.73
CPNE3O75131 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE3O75131 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.6■□□□□ 0.73
CPNE3O75131 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.59■□□□□ 0.73
CPNE3O75131 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE3O75131 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE3O75131 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE3O75131 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE3O75131 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE3O75131 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE3O75131 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.59■□□□□ 0.73
CPNE3O75131 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE3O75131 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
CPNE3O75131 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.59■□□□□ 0.73
CPNE3O75131 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
CPNE3O75131 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE3O75131 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.59■□□□□ 0.73
CPNE3O75131 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.59■□□□□ 0.73
CPNE3O75131 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE3O75131 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
CPNE3O75131 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CPNE3O75131 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CPNE3O75131 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE3O75131 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE3O75131 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
CPNE3O75131 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CPNE3O75131 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CPNE3O75131 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CPNE3O75131 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE3O75131 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE3O75131 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE3O75131 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE3O75131 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CPNE3O75131 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.58■□□□□ 0.72
CPNE3O75131 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.58■□□□□ 0.72
CPNE3O75131 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.58■□□□□ 0.72
CPNE3O75131 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE3O75131 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE3O75131 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE3O75131 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.58■□□□□ 0.72
CPNE3O75131 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE3O75131 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE3O75131 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.58■□□□□ 0.72
CPNE3O75131 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE3O75131 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.57■□□□□ 0.72
CPNE3O75131 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE3O75131 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE3O75131 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE3O75131 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE3O75131 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE3O75131 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.57■□□□□ 0.72
CPNE3O75131 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
CPNE3O75131 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.57■□□□□ 0.72
CPNE3O75131 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE3O75131 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE3O75131 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.57■□□□□ 0.72
CPNE3O75131 AC116050.2-201ENST00000612102 1779 ntBASIC19.57■□□□□ 0.72
CPNE3O75131 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE3O75131 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.56■□□□□ 0.72
CPNE3O75131 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.56■□□□□ 0.72
CPNE3O75131 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.56■□□□□ 0.72
CPNE3O75131 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.56■□□□□ 0.72
CPNE3O75131 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE3O75131 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.56■□□□□ 0.72
CPNE3O75131 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CPNE3O75131 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE3O75131 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CPNE3O75131 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE3O75131 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms