Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SOX1O00570 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.03■■□□□ 1.12
SOX1O00570 DBP-204ENST00000599385 709 ntTSL 3 BASIC22.03■■□□□ 1.12
SOX1O00570 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC22.03■■□□□ 1.12
SOX1O00570 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SOX1O00570 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
SOX1O00570 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SOX1O00570 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SOX1O00570 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.03■■□□□ 1.12
SOX1O00570 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SOX1O00570 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22.02■■□□□ 1.12
SOX1O00570 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.02■■□□□ 1.12
SOX1O00570 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SOX1O00570 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SOX1O00570 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SOX1O00570 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SOX1O00570 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC22.02■■□□□ 1.12
SOX1O00570 AL390719.1-204ENST00000412397 1219 ntBASIC22.02■■□□□ 1.12
SOX1O00570 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC22.02■■□□□ 1.12
SOX1O00570 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
SOX1O00570 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SOX1O00570 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.02■■□□□ 1.12
SOX1O00570 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
SOX1O00570 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
SOX1O00570 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
SOX1O00570 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
SOX1O00570 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SOX1O00570 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SOX1O00570 PCED1CP-201ENST00000419887 785 ntBASIC22.01■■□□□ 1.11
SOX1O00570 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.01■■□□□ 1.11
SOX1O00570 HCG4P8-203ENST00000443049 980 ntBASIC22.01■■□□□ 1.11
SOX1O00570 AC091390.4-202ENST00000476426 537 ntBASIC22.01■■□□□ 1.11
SOX1O00570 F2R-202ENST00000505600 442 ntTSL 2 BASIC22.01■■□□□ 1.11
SOX1O00570 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC22.01■■□□□ 1.11
SOX1O00570 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC22.01■■□□□ 1.11
SOX1O00570 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SOX1O00570 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC22.01■■□□□ 1.11
SOX1O00570 AC023511.2-201ENST00000618803 211 ntBASIC22.01■■□□□ 1.11
SOX1O00570 AL691432.3-201ENST00000621860 400 ntBASIC22.01■■□□□ 1.11
SOX1O00570 NBPF21P-201ENST00000425093 1451 ntBASIC22.01■■□□□ 1.11
SOX1O00570 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
SOX1O00570 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SOX1O00570 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SOX1O00570 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC22■■□□□ 1.11
SOX1O00570 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC22■■□□□ 1.11
SOX1O00570 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC22■■□□□ 1.11
SOX1O00570 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
SOX1O00570 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SOX1O00570 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC22■■□□□ 1.11
SOX1O00570 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC22■■□□□ 1.11
SOX1O00570 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC22■■□□□ 1.11
SOX1O00570 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SOX1O00570 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.99■■□□□ 1.11
SOX1O00570 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
SOX1O00570 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
SOX1O00570 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SOX1O00570 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.99■■□□□ 1.11
SOX1O00570 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SOX1O00570 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.99■■□□□ 1.11
SOX1O00570 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SOX1O00570 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SOX1O00570 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SOX1O00570 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
SOX1O00570 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.99■■□□□ 1.11
SOX1O00570 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.99■■□□□ 1.11
SOX1O00570 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.99■■□□□ 1.11
SOX1O00570 AP002982.1-201ENST00000492365 877 ntBASIC21.99■■□□□ 1.11
SOX1O00570 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.99■■□□□ 1.11
SOX1O00570 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.99■■□□□ 1.11
SOX1O00570 AC012313.10-201ENST00000623509 926 ntBASIC21.99■■□□□ 1.11
SOX1O00570 AC138932.3-201ENST00000567634 1902 ntBASIC21.99■■□□□ 1.11
SOX1O00570 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
SOX1O00570 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.99■■□□□ 1.11
SOX1O00570 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.99■■□□□ 1.11
SOX1O00570 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SOX1O00570 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.98■■□□□ 1.11
SOX1O00570 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SOX1O00570 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SOX1O00570 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.98■■□□□ 1.11
SOX1O00570 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SOX1O00570 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.98■■□□□ 1.11
SOX1O00570 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.98■■□□□ 1.11
SOX1O00570 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.98■■□□□ 1.11
SOX1O00570 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.98■■□□□ 1.11
SOX1O00570 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SOX1O00570 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.98■■□□□ 1.11
SOX1O00570 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.98■■□□□ 1.11
SOX1O00570 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SOX1O00570 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.98■■□□□ 1.11
SOX1O00570 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SOX1O00570 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
SOX1O00570 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SOX1O00570 FAM86EP-206ENST00000510506 987 ntBASIC21.97■■□□□ 1.11
SOX1O00570 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SOX1O00570 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
SOX1O00570 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SOX1O00570 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SOX1O00570 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SOX1O00570 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.96■■□□□ 1.11
SOX1O00570 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms