Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
TCRBV4S1A1TA0A5B7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TCRBV4S1A1TA0A5B7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TCRBV4S1A1TA0A5B7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TCRBV4S1A1TA0A5B7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TCRBV4S1A1TA0A5B7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TCRBV4S1A1TA0A5B7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.43■□□□□ 0.22
TCRBV4S1A1TA0A5B7 AL050303.2-201ENST00000619798 666 ntBASIC16.43■□□□□ 0.22
TCRBV4S1A1TA0A5B7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TCRBV4S1A1TA0A5B7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
TCRBV4S1A1TA0A5B7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TCRBV4S1A1TA0A5B7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.43■□□□□ 0.22
TCRBV4S1A1TA0A5B7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TCRBV4S1A1TA0A5B7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.43■□□□□ 0.22
TCRBV4S1A1TA0A5B7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TCRBV4S1A1TA0A5B7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TCRBV4S1A1TA0A5B7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.43■□□□□ 0.22
TCRBV4S1A1TA0A5B7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TCRBV4S1A1TA0A5B7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TCRBV4S1A1TA0A5B7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TCRBV4S1A1TA0A5B7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 AF201337.1-201ENST00000520239 748 ntBASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 AC006128.1-201ENST00000624704 1661 ntBASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRBV4S1A1TA0A5B7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV4S1A1TA0A5B7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.41■□□□□ 0.22
TCRBV4S1A1TA0A5B7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV4S1A1TA0A5B7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV4S1A1TA0A5B7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV4S1A1TA0A5B7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV4S1A1TA0A5B7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV4S1A1TA0A5B7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV4S1A1TA0A5B7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TCRBV4S1A1TA0A5B7 CNN2P6-201ENST00000439038 900 ntBASIC16.41■□□□□ 0.22
TCRBV4S1A1TA0A5B7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.41■□□□□ 0.22
TCRBV4S1A1TA0A5B7 TSPY6P-201ENST00000448518 926 ntBASIC16.41■□□□□ 0.22
TCRBV4S1A1TA0A5B7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.41■□□□□ 0.22
TCRBV4S1A1TA0A5B7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.41■□□□□ 0.22
TCRBV4S1A1TA0A5B7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.41■□□□□ 0.22
TCRBV4S1A1TA0A5B7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.41■□□□□ 0.22
TCRBV4S1A1TA0A5B7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV4S1A1TA0A5B7 AC105036.2-201ENST00000569468 176 ntBASIC16.41■□□□□ 0.22
TCRBV4S1A1TA0A5B7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.41■□□□□ 0.22
TCRBV4S1A1TA0A5B7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.41■□□□□ 0.22
TCRBV4S1A1TA0A5B7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV4S1A1TA0A5B7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV4S1A1TA0A5B7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV4S1A1TA0A5B7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
TCRBV4S1A1TA0A5B7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV4S1A1TA0A5B7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TCRBV4S1A1TA0A5B7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TCRBV4S1A1TA0A5B7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRBV4S1A1TA0A5B7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.4■□□□□ 0.22
TCRBV4S1A1TA0A5B7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRBV4S1A1TA0A5B7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.4■□□□□ 0.22
TCRBV4S1A1TA0A5B7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.4■□□□□ 0.22
TCRBV4S1A1TA0A5B7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.4■□□□□ 0.22
TCRBV4S1A1TA0A5B7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.4■□□□□ 0.22
TCRBV4S1A1TA0A5B7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRBV4S1A1TA0A5B7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TCRBV4S1A1TA0A5B7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.4■□□□□ 0.22
TCRBV4S1A1TA0A5B7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TCRBV4S1A1TA0A5B7 AC008694.1-202ENST00000636953 945 ntBASIC16.4■□□□□ 0.22
TCRBV4S1A1TA0A5B7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.4■□□□□ 0.22
TCRBV4S1A1TA0A5B7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRBV4S1A1TA0A5B7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.4■□□□□ 0.22
TCRBV4S1A1TA0A5B7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRBV4S1A1TA0A5B7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRBV4S1A1TA0A5B7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRBV4S1A1TA0A5B7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.4■□□□□ 0.22
TCRBV4S1A1TA0A5B7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TCRBV4S1A1TA0A5B7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.4■□□□□ 0.22
TCRBV4S1A1TA0A5B7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TCRBV4S1A1TA0A5B7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms