Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 AL035685.1-201ENST00000636663 812 ntBASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV27A0A0K0K1C4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV27A0A0K0K1C4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC14.44□□□□□ -0.1
TRBV27A0A0K0K1C4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV27A0A0K0K1C4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV27A0A0K0K1C4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV27A0A0K0K1C4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV27A0A0K0K1C4 AC061975.6-201ENST00000579045 1553 ntBASIC14.44□□□□□ -0.1
TRBV27A0A0K0K1C4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TRBV27A0A0K0K1C4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC14.44□□□□□ -0.1
TRBV27A0A0K0K1C4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV27A0A0K0K1C4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV27A0A0K0K1C4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV27A0A0K0K1C4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC14.44□□□□□ -0.1
TRBV27A0A0K0K1C4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TRBV27A0A0K0K1C4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC14.44□□□□□ -0.1
TRBV27A0A0K0K1C4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC14.44□□□□□ -0.1
TRBV27A0A0K0K1C4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC14.44□□□□□ -0.1
TRBV27A0A0K0K1C4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC14.44□□□□□ -0.1
TRBV27A0A0K0K1C4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV27A0A0K0K1C4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV27A0A0K0K1C4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV27A0A0K0K1C4 AC125437.2-201ENST00000625180 2167 ntBASIC14.44□□□□□ -0.1
TRBV27A0A0K0K1C4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRBV27A0A0K0K1C4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV27A0A0K0K1C4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TRBV27A0A0K0K1C4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 AC126544.1-201ENST00000580842 1059 ntBASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 LBX2-AS1-202ENST00000603175 2083 ntBASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
TRBV27A0A0K0K1C4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV27A0A0K0K1C4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms