Protein–RNA interactions for Protein: A0A0J9YXQ4

PNMA6E, Paraneoplastic antigen Ma6E, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6EA0A0J9YXQ4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PNMA6EA0A0J9YXQ4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC25.46■■□□□ 1.67
PNMA6EA0A0J9YXQ4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC25.46■■□□□ 1.67
PNMA6EA0A0J9YXQ4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PNMA6EA0A0J9YXQ4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
PNMA6EA0A0J9YXQ4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PNMA6EA0A0J9YXQ4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
PNMA6EA0A0J9YXQ4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PNMA6EA0A0J9YXQ4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
PNMA6EA0A0J9YXQ4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
PNMA6EA0A0J9YXQ4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC25.46■■□□□ 1.67
PNMA6EA0A0J9YXQ4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC25.46■■□□□ 1.67
PNMA6EA0A0J9YXQ4 BX276092.2-201ENST00000417668 665 ntBASIC25.46■■□□□ 1.67
PNMA6EA0A0J9YXQ4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC25.46■■□□□ 1.67
PNMA6EA0A0J9YXQ4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PNMA6EA0A0J9YXQ4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
PNMA6EA0A0J9YXQ4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PNMA6EA0A0J9YXQ4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
PNMA6EA0A0J9YXQ4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
PNMA6EA0A0J9YXQ4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.67
PNMA6EA0A0J9YXQ4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
PNMA6EA0A0J9YXQ4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
PNMA6EA0A0J9YXQ4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
PNMA6EA0A0J9YXQ4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
PNMA6EA0A0J9YXQ4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
PNMA6EA0A0J9YXQ4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PNMA6EA0A0J9YXQ4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC25.45■■□□□ 1.66
PNMA6EA0A0J9YXQ4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC25.45■■□□□ 1.66
PNMA6EA0A0J9YXQ4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC25.45■■□□□ 1.66
PNMA6EA0A0J9YXQ4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC25.45■■□□□ 1.66
PNMA6EA0A0J9YXQ4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC25.45■■□□□ 1.66
PNMA6EA0A0J9YXQ4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
PNMA6EA0A0J9YXQ4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PNMA6EA0A0J9YXQ4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
PNMA6EA0A0J9YXQ4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC25.45■■□□□ 1.66
PNMA6EA0A0J9YXQ4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PNMA6EA0A0J9YXQ4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
PNMA6EA0A0J9YXQ4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC25.44■■□□□ 1.66
PNMA6EA0A0J9YXQ4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC25.44■■□□□ 1.66
PNMA6EA0A0J9YXQ4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC25.44■■□□□ 1.66
PNMA6EA0A0J9YXQ4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PNMA6EA0A0J9YXQ4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PNMA6EA0A0J9YXQ4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC25.43■■□□□ 1.66
PNMA6EA0A0J9YXQ4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC25.43■■□□□ 1.66
PNMA6EA0A0J9YXQ4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PNMA6EA0A0J9YXQ4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PNMA6EA0A0J9YXQ4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
PNMA6EA0A0J9YXQ4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PNMA6EA0A0J9YXQ4 KRT18P68-201ENST00000392293 1000 ntBASIC25.43■■□□□ 1.66
PNMA6EA0A0J9YXQ4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC25.43■■□□□ 1.66
PNMA6EA0A0J9YXQ4 AC142086.2-201ENST00000569753 217 ntBASIC25.43■■□□□ 1.66
PNMA6EA0A0J9YXQ4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PNMA6EA0A0J9YXQ4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
PNMA6EA0A0J9YXQ4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
PNMA6EA0A0J9YXQ4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
PNMA6EA0A0J9YXQ4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PNMA6EA0A0J9YXQ4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC25.42■■□□□ 1.66
PNMA6EA0A0J9YXQ4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC25.42■■□□□ 1.66
PNMA6EA0A0J9YXQ4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PNMA6EA0A0J9YXQ4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PNMA6EA0A0J9YXQ4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PNMA6EA0A0J9YXQ4 SLC29A4P1-201ENST00000398760 971 ntBASIC25.42■■□□□ 1.66
PNMA6EA0A0J9YXQ4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC25.42■■□□□ 1.66
PNMA6EA0A0J9YXQ4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC25.42■■□□□ 1.66
PNMA6EA0A0J9YXQ4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PNMA6EA0A0J9YXQ4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
PNMA6EA0A0J9YXQ4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC25.42■■□□□ 1.66
PNMA6EA0A0J9YXQ4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC25.42■■□□□ 1.66
PNMA6EA0A0J9YXQ4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC25.42■■□□□ 1.66
PNMA6EA0A0J9YXQ4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
PNMA6EA0A0J9YXQ4 KRT8P36-201ENST00000489121 1440 ntBASIC25.41■■□□□ 1.66
PNMA6EA0A0J9YXQ4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
PNMA6EA0A0J9YXQ4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PNMA6EA0A0J9YXQ4 AL355802.2-201ENST00000402069 882 ntBASIC25.41■■□□□ 1.66
PNMA6EA0A0J9YXQ4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC25.41■■□□□ 1.66
PNMA6EA0A0J9YXQ4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC25.41■■□□□ 1.66
PNMA6EA0A0J9YXQ4 AL356652.1-201ENST00000615962 565 ntBASIC25.41■■□□□ 1.66
PNMA6EA0A0J9YXQ4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC25.41■■□□□ 1.66
PNMA6EA0A0J9YXQ4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PNMA6EA0A0J9YXQ4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
PNMA6EA0A0J9YXQ4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC25.41■■□□□ 1.66
PNMA6EA0A0J9YXQ4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PNMA6EA0A0J9YXQ4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PNMA6EA0A0J9YXQ4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
PNMA6EA0A0J9YXQ4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
PNMA6EA0A0J9YXQ4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC25.4■■□□□ 1.66
PNMA6EA0A0J9YXQ4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
PNMA6EA0A0J9YXQ4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PNMA6EA0A0J9YXQ4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PNMA6EA0A0J9YXQ4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PNMA6EA0A0J9YXQ4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PNMA6EA0A0J9YXQ4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PNMA6EA0A0J9YXQ4 AL157384.1-201ENST00000445995 2473 ntBASIC25.39■■□□□ 1.66
PNMA6EA0A0J9YXQ4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PNMA6EA0A0J9YXQ4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
PNMA6EA0A0J9YXQ4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PNMA6EA0A0J9YXQ4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC25.39■■□□□ 1.66
PNMA6EA0A0J9YXQ4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC25.39■■□□□ 1.66
PNMA6EA0A0J9YXQ4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC25.39■■□□□ 1.66
PNMA6EA0A0J9YXQ4 AC105020.6-201ENST00000621523 1217 ntBASIC25.39■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms