Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV2A0A0B4J234 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV2A0A0B4J234 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
TRAV2A0A0B4J234 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV2A0A0B4J234 BET1L-204ENST00000410108 637 ntTSL 3 BASIC15.45■□□□□ 0.06
TRAV2A0A0B4J234 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV2A0A0B4J234 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRAV2A0A0B4J234 CASP6-205ENST00000505486 538 ntTSL 4 BASIC15.45■□□□□ 0.06
TRAV2A0A0B4J234 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV2A0A0B4J234 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV2A0A0B4J234 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRAV2A0A0B4J234 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV2A0A0B4J234 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV2A0A0B4J234 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV2A0A0B4J234 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRAV2A0A0B4J234 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRAV2A0A0B4J234 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV2A0A0B4J234 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV2A0A0B4J234 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV2A0A0B4J234 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV2A0A0B4J234 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV2A0A0B4J234 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV2A0A0B4J234 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
TRAV2A0A0B4J234 BMP1-204ENST00000397814 836 ntTSL 4 BASIC15.44■□□□□ 0.06
TRAV2A0A0B4J234 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV2A0A0B4J234 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC15.44■□□□□ 0.06
TRAV2A0A0B4J234 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV2A0A0B4J234 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.44■□□□□ 0.06
TRAV2A0A0B4J234 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV2A0A0B4J234 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV2A0A0B4J234 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
TRAV2A0A0B4J234 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV2A0A0B4J234 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV2A0A0B4J234 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV2A0A0B4J234 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV2A0A0B4J234 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV2A0A0B4J234 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV2A0A0B4J234 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV2A0A0B4J234 AC006128.1-201ENST00000624704 1661 ntBASIC15.44■□□□□ 0.06
TRAV2A0A0B4J234 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV2A0A0B4J234 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV2A0A0B4J234 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 PGM5P4-201ENST00000421970 445 ntBASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 AC007322.1-201ENST00000426983 750 ntBASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 UQCRFS1P1-201ENST00000435169 820 ntBASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 STAC-204ENST00000457375 1366 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV2A0A0B4J234 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
TRAV2A0A0B4J234 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRAV2A0A0B4J234 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV2A0A0B4J234 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRAV2A0A0B4J234 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV2A0A0B4J234 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV2A0A0B4J234 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV2A0A0B4J234 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV2A0A0B4J234 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV2A0A0B4J234 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV2A0A0B4J234 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV2A0A0B4J234 CNN2P6-201ENST00000439038 900 ntBASIC15.42■□□□□ 0.06
TRAV2A0A0B4J234 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV2A0A0B4J234 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV2A0A0B4J234 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAV2A0A0B4J234 AC100791.3-201ENST00000617619 330 ntBASIC15.42■□□□□ 0.06
TRAV2A0A0B4J234 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV2A0A0B4J234 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV2A0A0B4J234 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV2A0A0B4J234 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRAV2A0A0B4J234 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV2A0A0B4J234 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAV2A0A0B4J234 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
TRAV2A0A0B4J234 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV2A0A0B4J234 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV2A0A0B4J234 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms