Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 AC009502.1-201ENST00000607654 1965 ntBASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 DMP1-201ENST00000282479 2634 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 RBM23-204ENST00000399922 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 RUBCN-201ENST00000273582 6955 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 RBM44-202ENST00000409864 3449 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 NDP-201ENST00000378062 1833 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 SAMMSON-218ENST00000641601 1847 ntBASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 NXPE2-201ENST00000389586 1873 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 TIMELESS-201ENST00000229201 4376 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 MSL3-203ENST00000361672 2256 ntTSL 2 BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 HNRNPC-223ENST00000556142 1599 ntTSL 5 BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 MITF-202ENST00000314589 1993 ntTSL 2 BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 PPP6R3-214ENST00000527403 4862 ntTSL 5 BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 KRTAP13-4-201ENST00000334068 797 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 OR10J5-201ENST00000334857 930 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 RIT1-201ENST00000368322 855 ntTSL 3 BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 COX7A2-201ENST00000370081 914 ntAPPRIS P2 TSL 3 BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 RMDN2-AS1-201ENST00000414365 859 ntTSL 4 BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 CHCHD2P5-201ENST00000421414 400 ntBASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 CICP10-201ENST00000439497 198 ntBASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 BX470209.2-201ENST00000442086 928 ntTSL 3 BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 AL445493.2-201ENST00000442684 945 ntTSL 3 BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 FTH1P27-201ENST00000449509 551 ntBASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 AC087501.2-201ENST00000466869 581 ntBASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 CSTA-202ENST00000479204 821 ntTSL 2 BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 PDPN-209ENST00000510906 786 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 AC109588.1-202ENST00000515720 880 ntTSL 3 BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 AP002469.1-201ENST00000526011 1043 ntBASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 LINC02359-201ENST00000545642 643 ntTSL 3 BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 AL133163.2-201ENST00000555024 624 ntTSL 3 BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 AC009060.2-201ENST00000569264 106 ntBASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 RN7SL246P-201ENST00000584467 296 ntBASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 AC080037.1-201ENST00000584975 889 ntTSL 3 BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 LINC00969-233ENST00000597871 839 ntTSL 5 BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 PROX1-AS1-208ENST00000601335 691 ntTSL 5 BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 AL021878.2-201ENST00000602718 399 ntBASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 HDAC1P2-202ENST00000602936 807 ntBASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 AC104117.5-201ENST00000606195 547 ntBASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 AL137798.1-201ENST00000607700 339 ntBASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 AC007216.5-201ENST00000612457 109 ntBASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 RN7SL796P-201ENST00000613991 291 ntBASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 AC138932.4-201ENST00000619102 109 ntBASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 AC138969.4-201ENST00000620593 109 ntBASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 OR7A2P-202ENST00000641312 1219 ntBASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 LIPH-202ENST00000424591 2065 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 DDR1-AS1-206ENST00000458361 3994 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 ECM2-201ENST00000344604 3253 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 ZNF217-201ENST00000302342 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 ZNF2-202ENST00000611463 3737 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 ASNSP1-202ENST00000641079 1352 ntBASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 SEPT6-203ENST00000354416 4652 ntAPPRIS ALT1 TSL 5 BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 ZNF169-201ENST00000340911 2336 ntTSL 2 BASIC9.47□□□□□ -0.89
SYCE2Q6PIF2 MRPS11-201ENST00000325844 3644 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SYCE2Q6PIF2 AL158071.4-201ENST00000608358 4125 ntBASIC9.46□□□□□ -0.89
SYCE2Q6PIF2 XKRX-201ENST00000372956 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SYCE2Q6PIF2 AC093904.4-201ENST00000565044 3273 ntBASIC9.46□□□□□ -0.89
SYCE2Q6PIF2 DNAJC16-203ENST00000375849 3446 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
SYCE2Q6PIF2 EFHC1-213ENST00000635996 2548 ntTSL 5 BASIC9.46□□□□□ -0.89
SYCE2Q6PIF2 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SYCE2Q6PIF2 TTC23-214ENST00000558663 2068 ntAPPRIS P2 TSL 2 BASIC9.46□□□□□ -0.89
SYCE2Q6PIF2 EXO1-202ENST00000366548 3473 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
SYCE2Q6PIF2 NAALAD2-204ENST00000525171 1613 ntTSL 2 BASIC9.46□□□□□ -0.89
SYCE2Q6PIF2 ABCA8-203ENST00000430352 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
SYCE2Q6PIF2 GPR161-210ENST00000546300 7388 ntTSL 2 BASIC9.46□□□□□ -0.89
SYCE2Q6PIF2 TMEM35A-201ENST00000372930 2195 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SYCE2Q6PIF2 ADGRG5-201ENST00000340339 3767 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SYCE2Q6PIF2 DDIAS-207ENST00000528759 3278 ntTSL 2 BASIC9.46□□□□□ -0.89
SYCE2Q6PIF2 FIGNL1-214ENST00000617389 3259 ntAPPRIS P1 TSL 4 BASIC9.46□□□□□ -0.89
SYCE2Q6PIF2 DEFA5-201ENST00000330590 449 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SYCE2Q6PIF2 AKR1E2-203ENST00000345253 913 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SYCE2Q6PIF2 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
SYCE2Q6PIF2 AC012462.3-201ENST00000412951 131 ntTSL 3 BASIC9.46□□□□□ -0.9
SYCE2Q6PIF2 AC023669.1-201ENST00000414915 524 ntTSL 3 BASIC9.46□□□□□ -0.9
SYCE2Q6PIF2 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC9.46□□□□□ -0.9
SYCE2Q6PIF2 HIPK1-AS1-203ENST00000441071 571 ntTSL 3 BASIC9.46□□□□□ -0.9
SYCE2Q6PIF2 AL035417.1-201ENST00000442754 214 ntBASIC9.46□□□□□ -0.9
SYCE2Q6PIF2 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC9.46□□□□□ -0.9
SYCE2Q6PIF2 IAH1-205ENST00000482918 863 ntTSL 3 BASIC9.46□□□□□ -0.9
SYCE2Q6PIF2 RPL12P37-201ENST00000486874 495 ntBASIC9.46□□□□□ -0.9
SYCE2Q6PIF2 RN7SL434P-201ENST00000495872 271 ntBASIC9.46□□□□□ -0.9
SYCE2Q6PIF2 AC027343.3-201ENST00000504494 564 ntTSL 4 BASIC9.46□□□□□ -0.9
SYCE2Q6PIF2 AC116337.3-201ENST00000505200 846 ntTSL 3 BASIC9.46□□□□□ -0.9
SYCE2Q6PIF2 AC084128.1-201ENST00000523112 501 ntTSL 3 BASIC9.46□□□□□ -0.9
SYCE2Q6PIF2 AC083841.1-201ENST00000523657 670 ntTSL 2 BASIC9.46□□□□□ -0.9
SYCE2Q6PIF2 AC109466.1-203ENST00000524297 1083 ntTSL 3 BASIC9.46□□□□□ -0.9
SYCE2Q6PIF2 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC9.46□□□□□ -0.9
SYCE2Q6PIF2 AP005597.3-201ENST00000532369 799 ntBASIC9.46□□□□□ -0.9
SYCE2Q6PIF2 SLC5A4P1-201ENST00000532944 612 ntBASIC9.46□□□□□ -0.9
SYCE2Q6PIF2 WTAPP1-203ENST00000537774 400 ntBASIC9.46□□□□□ -0.9
SYCE2Q6PIF2 STXBP6-206ENST00000548369 682 ntTSL 2 BASIC9.46□□□□□ -0.9
SYCE2Q6PIF2 AC126335.1-201ENST00000568414 510 ntTSL 2 BASIC9.46□□□□□ -0.9
SYCE2Q6PIF2 AF001548.1-201ENST00000577048 550 ntTSL 4 BASIC9.46□□□□□ -0.9
SYCE2Q6PIF2 AC064805.1-201ENST00000581412 529 ntTSL 4 BASIC9.46□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms