Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 SF3B1-211ENST00000487698 2127 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 URM1-202ENST00000372850 3045 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 MTCL1-207ENST00000518815 3963 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 AL451074.2-201ENST00000423121 2150 ntTSL 2 BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 IQSEC2-201ENST00000375365 4004 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 LINC01964-201ENST00000567718 3137 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 TMEM244-201ENST00000368143 545 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 FCAR-206ENST00000391724 762 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 AL645937.5-202ENST00000415595 944 ntBASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 PPP1R2P2-201ENST00000440405 613 ntBASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 SERPINA7P1-201ENST00000443077 631 ntBASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 AC239859.3-201ENST00000456469 408 ntTSL 5 BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 RN7SL749P-201ENST00000460421 290 ntBASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 NR1I3-228ENST00000511676 1061 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 AC139783.1-201ENST00000515618 681 ntBASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 NPIPA3-201ENST00000526520 954 ntTSL 5 BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 NPIPA2-201ENST00000529166 1110 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 AP006437.1-202ENST00000530327 933 ntBASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 NPIPA2-202ENST00000530328 954 ntTSL 5 BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 NPIPA3-202ENST00000531598 1155 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 AC022880.2-201ENST00000532664 270 ntBASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 NPIPA5-202ENST00000534094 954 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 NBPF5P-202ENST00000545941 1032 ntBASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 AC018448.2-201ENST00000548295 305 ntBASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 AC087633.1-201ENST00000554649 715 ntTSL 3 BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 AC015818.2-201ENST00000563569 840 ntBASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 AF067845.1-201ENST00000567210 1192 ntBASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 AL157931.1-201ENST00000575845 585 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 FAM95B1-209ENST00000590863 789 ntTSL 2 BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 AC073218.2-201ENST00000606468 295 ntTSL 5 BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 AL669942.1-201ENST00000611307 713 ntTSL 5 BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 GTF2H2B-204ENST00000513202 1954 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 GGA3-201ENST00000537686 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 TTPAL-202ENST00000372904 6234 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 PDZPH1P-201ENST00000412514 1783 ntBASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 SF3A3-201ENST00000373019 3673 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 AC092620.3-201ENST00000562796 2764 ntBASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 ERC1-225ENST00000611180 2832 ntTSL 5 BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 SAMD8-204ENST00000542569 6782 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 ZSCAN31-203ENST00000414429 3551 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 BHLHB9-205ENST00000457056 4082 ntAPPRIS P1 TSL 4 BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 C5orf22-201ENST00000325366 3612 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 ZSCAN5B-201ENST00000358992 1626 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 ABCC11-203ENST00000394747 4862 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 LCA5-203ENST00000467898 2894 ntTSL 5 BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 JADE1-214ENST00000611140 5648 ntAPPRIS P3 TSL 5 BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 FCN1-202ENST00000616356 4369 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 TMPRSS4-AS1-204ENST00000636151 3397 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 AC139495.3-201ENST00000515156 4437 ntBASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 AP004782.1-201ENST00000623990 3433 ntBASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 GYG2-209ENST00000639373 2900 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SYCE2Q6PIF2 TMEM108-AS1-202ENST00000505721 2427 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 LCP2-210ENST00000628092 2421 ntAPPRIS ALT1 TSL 5 BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 ZSCAN32-212ENST00000574940 2180 ntTSL 2 BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 DOCK8-202ENST00000382331 1922 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 GTF2IP1-205ENST00000618412 2990 ntTSL 2 BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 NHSL2-207ENST00000633930 13660 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 SLC12A3-203ENST00000563236 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 AC073065.1-201ENST00000411678 2866 ntBASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 MERTK-202ENST00000409780 3189 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 LINC01310-201ENST00000380981 4015 ntTSL 2 BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 APOBEC1-201ENST00000229304 879 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 Metazoa_SRP.5-201ENST00000356560 281 ntBASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 RNA5SP74-201ENST00000363538 109 ntBASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 FRG1JP-201ENST00000376334 931 ntBASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 OR10J1-201ENST00000423932 1090 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 KIF9-203ENST00000425452 640 ntTSL 3 BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 RPL3P8-201ENST00000432928 1191 ntBASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 AL117338.1-201ENST00000434552 631 ntTSL 5 BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 LINC01320-202ENST00000453774 1205 ntTSL 3 BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 AC020595.1-201ENST00000456446 533 ntTSL 3 BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 DNAJC9-AS1-203ENST00000457758 548 ntTSL 3 BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 AC108114.1-201ENST00000477321 437 ntBASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 THUMPD3-AS1-205ENST00000481221 683 ntTSL 3 BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 OR7E121P-201ENST00000494533 1022 ntBASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 RNA5SP460-201ENST00000516789 100 ntBASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 RPS20-204ENST00000519606 424 ntTSL 3 BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 AC091175.1-201ENST00000522168 572 ntBASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 AC018618.1-202ENST00000559590 395 ntTSL 3 BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 ZNF559-206ENST00000587557 2991 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 AL021808.1-201ENST00000604325 1117 ntBASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 AC025518.2-201ENST00000605229 492 ntBASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 AC103691.1-201ENST00000619654 520 ntBASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 Z98752.3-201ENST00000621802 566 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 RPS20-201ENST00000009589 626 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 CSGALNACT1-201ENST00000332246 3872 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 NUDCD1-201ENST00000239690 4217 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 PAX6-231ENST00000606377 6901 ntAPPRIS P4 TSL 5 BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 COL17A1-203ENST00000393211 1610 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 CBWD1-204ENST00000377447 2513 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 AC092683.1-204ENST00000610408 2830 ntTSL 2 BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 AC159540.2-202ENST00000613749 2830 ntTSL 2 BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 AC091013.1-201ENST00000499752 3734 ntTSL 2 BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 RNF141-201ENST00000265981 4074 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 SLIT3-202ENST00000404867 8903 ntTSL 5 BASIC9.48□□□□□ -0.89
SYCE2Q6PIF2 DCX-210ENST00000637453 2275 ntAPPRIS ALT1 TSL 5 BASIC9.48□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms