Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC152007.1-201ENST00000428521 224 ntBASIC9.56□□□□□ -0.88
MTHFRP42898 RPS29P3-201ENST00000439929 171 ntBASIC9.56□□□□□ -0.88
MTHFRP42898 TISP43-205ENST00000440359 543 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
MTHFRP42898 DBIL5P-202ENST00000453414 250 ntBASIC9.56□□□□□ -0.88
MTHFRP42898 RN7SL141P-201ENST00000484215 266 ntBASIC9.56□□□□□ -0.88
MTHFRP42898 AC025244.1-201ENST00000505930 469 ntTSL 3 BASIC9.56□□□□□ -0.88
MTHFRP42898 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC9.56□□□□□ -0.88
MTHFRP42898 AP002892.2-201ENST00000544195 560 ntTSL 4 BASIC9.56□□□□□ -0.88
MTHFRP42898 AC009060.2-201ENST00000569264 106 ntBASIC9.56□□□□□ -0.88
MTHFRP42898 ZNF738-203ENST00000594245 1086 ntTSL 2 BASIC9.56□□□□□ -0.88
MTHFRP42898 HDAC1P2-202ENST00000602936 807 ntBASIC9.56□□□□□ -0.88
MTHFRP42898 AC007216.5-201ENST00000612457 109 ntBASIC9.56□□□□□ -0.88
MTHFRP42898 BX510359.8-201ENST00000617713 296 ntBASIC9.56□□□□□ -0.88
MTHFRP42898 AC138932.4-201ENST00000619102 109 ntBASIC9.56□□□□□ -0.88
MTHFRP42898 AC138969.4-201ENST00000620593 109 ntBASIC9.56□□□□□ -0.88
MTHFRP42898 CBFA2T2-210ENST00000543126 3502 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
MTHFRP42898 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC9.56□□□□□ -0.88
MTHFRP42898 TMEM241-201ENST00000383233 2934 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
MTHFRP42898 CLDN2-202ENST00000540876 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
MTHFRP42898 PDCL-201ENST00000259467 2813 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
MTHFRP42898 NEPRO-202ENST00000383675 4672 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
MTHFRP42898 ZNF160-214ENST00000601421 4688 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
MTHFRP42898 DMP1-201ENST00000282479 2634 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
MTHFRP42898 SSBP3-AS1-201ENST00000361350 2624 ntBASIC9.56□□□□□ -0.88
MTHFRP42898 MARF1-211ENST00000551742 5900 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
MTHFRP42898 BARD1-213ENST00000619009 3967 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
MTHFRP42898 CSNK1G1-211ENST00000635142 5548 ntTSL 5 BASIC9.56□□□□□ -0.88
MTHFRP42898 CEP44-204ENST00000457424 3290 ntTSL 2 BASIC9.56□□□□□ -0.88
MTHFRP42898 CEACAM5-201ENST00000221992 2874 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
MTHFRP42898 AC026877.1-201ENST00000476047 1411 ntBASIC9.56□□□□□ -0.88
MTHFRP42898 RSPH10B-203ENST00000405415 3222 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
MTHFRP42898 ZNF709-201ENST00000397732 4910 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
MTHFRP42898 RPGR-201ENST00000318842 3108 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
MTHFRP42898 LDHB-201ENST00000350669 1303 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
MTHFRP42898 SLC38A4-202ENST00000447411 3791 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
MTHFRP42898 LINC01299-201ENST00000520902 2634 ntTSL 2 BASIC9.55□□□□□ -0.88
MTHFRP42898 SLC30A8-202ENST00000456015 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
MTHFRP42898 IL1R1-203ENST00000409589 3544 ntTSL 5 BASIC9.55□□□□□ -0.88
MTHFRP42898 PPIL2-203ENST00000406385 3875 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
MTHFRP42898 PDE6A-201ENST00000255266 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
MTHFRP42898 C1GALT1C1-202ENST00000371313 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
MTHFRP42898 FNDC3A-201ENST00000378383 2037 ntTSL 2 BASIC9.55□□□□□ -0.88
MTHFRP42898 ACOT9-204ENST00000379303 3117 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
MTHFRP42898 C2orf49-201ENST00000258457 4768 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
MTHFRP42898 KRIT1-204ENST00000394507 4762 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
MTHFRP42898 TMEM215-201ENST00000342743 3581 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
MTHFRP42898 PRRC2C-203ENST00000392078 1919 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
MTHFRP42898 NCOA1-204ENST00000405141 7405 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
MTHFRP42898 SELENOT-207ENST00000615547 3488 ntTSL 5 BASIC9.55□□□□□ -0.88
MTHFRP42898 AIG1-201ENST00000275235 1202 ntTSL 2 BASIC9.55□□□□□ -0.88
MTHFRP42898 ZNF254-201ENST00000339642 511 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
MTHFRP42898 AC104699.1-201ENST00000352271 414 ntTSL 3 BASIC9.55□□□□□ -0.88
MTHFRP42898 RAB18-202ENST00000375802 617 ntTSL 5 BASIC9.55□□□□□ -0.88
MTHFRP42898 U3.17-201ENST00000390863 203 ntBASIC9.55□□□□□ -0.88
MTHFRP42898 HPN-AS1-201ENST00000392227 1124 ntTSL 2 BASIC9.55□□□□□ -0.88
MTHFRP42898 FCRL6-204ENST00000392235 947 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
MTHFRP42898 RAET1K-201ENST00000403651 784 ntBASIC9.55□□□□□ -0.88
MTHFRP42898 RIMKLBP1-201ENST00000408914 1164 ntBASIC9.55□□□□□ -0.88
MTHFRP42898 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC9.55□□□□□ -0.88
MTHFRP42898 ATP5G1P5-201ENST00000429024 411 ntBASIC9.55□□□□□ -0.88
MTHFRP42898 AL450311.1-201ENST00000434931 576 ntTSL 4 BASIC9.55□□□□□ -0.88
MTHFRP42898 AL592114.3-201ENST00000437919 446 ntTSL 3 BASIC9.55□□□□□ -0.88
MTHFRP42898 BX293535.1-201ENST00000443579 283 ntTSL 3 BASIC9.55□□□□□ -0.88
MTHFRP42898 SLC39A12-AS1-202ENST00000445287 1006 ntTSL 3 BASIC9.55□□□□□ -0.88
MTHFRP42898 AL353072.1-201ENST00000446021 442 ntBASIC9.55□□□□□ -0.88
MTHFRP42898 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC9.55□□□□□ -0.88
MTHFRP42898 DAP3P2-201ENST00000458547 510 ntBASIC9.55□□□□□ -0.88
MTHFRP42898 AC090164.1-201ENST00000560214 664 ntBASIC9.55□□□□□ -0.88
MTHFRP42898 AC120498.4-201ENST00000561649 320 ntTSL 3 BASIC9.55□□□□□ -0.88
MTHFRP42898 AC138907.5-201ENST00000561744 273 ntTSL 5 BASIC9.55□□□□□ -0.88
MTHFRP42898 AC013565.2-201ENST00000564874 310 ntBASIC9.55□□□□□ -0.88
MTHFRP42898 FRG2JP-201ENST00000568299 832 ntBASIC9.55□□□□□ -0.88
MTHFRP42898 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
MTHFRP42898 AC104958.2-201ENST00000605955 1141 ntBASIC9.55□□□□□ -0.88
MTHFRP42898 AC024559.2-202ENST00000615240 529 ntTSL 5 BASIC9.55□□□□□ -0.88
MTHFRP42898 Metazoa_SRP.176-201ENST00000619772 282 ntBASIC9.55□□□□□ -0.88
MTHFRP42898 LAMTOR5-AS1-246ENST00000630298 858 ntTSL 5 BASIC9.55□□□□□ -0.88
MTHFRP42898 AC012377.1-202ENST00000558675 4811 ntBASIC9.55□□□□□ -0.88
MTHFRP42898 C20orf197-201ENST00000625080 2732 ntTSL 2 BASIC9.55□□□□□ -0.88
MTHFRP42898 SPIN3-205ENST00000638289 4614 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
MTHFRP42898 CLUL1-203ENST00000540035 2199 ntTSL 2 BASIC9.55□□□□□ -0.88
MTHFRP42898 RAET1E-207ENST00000532335 2099 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
MTHFRP42898 NCEH1-205ENST00000538775 4315 ntAPPRIS ALT2 TSL 2 BASIC9.55□□□□□ -0.88
MTHFRP42898 DDX11-229ENST00000545668 3751 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
MTHFRP42898 NANOGP1-202ENST00000607111 1982 ntTSL 5 BASIC9.55□□□□□ -0.88
MTHFRP42898 SS18-205ENST00000542420 2321 ntTSL 2 BASIC9.55□□□□□ -0.88
MTHFRP42898 NIP7-202ENST00000254941 1887 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
MTHFRP42898 CACNB2-205ENST00000377319 3116 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
MTHFRP42898 GSTCD-211ENST00000515279 4273 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
MTHFRP42898 UNC5C-201ENST00000453304 9875 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
MTHFRP42898 AC008758.1-201ENST00000428311 4505 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
MTHFRP42898 MRPS11-201ENST00000325844 3644 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
MTHFRP42898 SSX2B-204ENST00000616191 1344 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
MTHFRP42898 MTBP-201ENST00000305949 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
MTHFRP42898 C11orf57-201ENST00000280352 3693 ntAPPRIS ALT1 TSL 2 BASIC9.54□□□□□ -0.88
MTHFRP42898 C11orf57-202ENST00000393047 3669 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
MTHFRP42898 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
MTHFRP42898 RAD17-213ENST00000509734 3233 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
MTHFRP42898 FAM71B-201ENST00000302938 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
MTHFRP42898 TPM1-233ENST00000610733 3957 ntTSL 2 BASIC9.54□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms