Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC136469.1-201ENST00000595706 511 ntTSL 5 BASIC9.48□□□□□ -0.89
SLC1A1P43005 DPPA5P1-201ENST00000600430 340 ntBASIC9.48□□□□□ -0.89
SLC1A1P43005 AL031281.2-201ENST00000606754 748 ntBASIC9.48□□□□□ -0.89
SLC1A1P43005 AC091614.1-201ENST00000606898 879 ntTSL 3 BASIC9.48□□□□□ -0.89
SLC1A1P43005 AC079766.1-201ENST00000608774 427 ntBASIC9.48□□□□□ -0.89
SLC1A1P43005 AC110741.3-201ENST00000611983 659 ntBASIC9.48□□□□□ -0.89
SLC1A1P43005 MIR6083-201ENST00000612737 106 ntBASIC9.48□□□□□ -0.89
SLC1A1P43005 TEX46-203ENST00000622840 479 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
SLC1A1P43005 PDCD4-201ENST00000280154 3602 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SLC1A1P43005 C11orf70-201ENST00000434758 2193 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
SLC1A1P43005 RAD9B-203ENST00000409246 2794 ntTSL 2 BASIC9.48□□□□□ -0.89
SLC1A1P43005 ZNF160-201ENST00000355147 1304 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SLC1A1P43005 FYTTD1-203ENST00000415708 1342 ntTSL 2 BASIC9.48□□□□□ -0.89
SLC1A1P43005 AMD1-202ENST00000368877 1605 ntTSL 2 BASIC9.48□□□□□ -0.89
SLC1A1P43005 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC9.48□□□□□ -0.89
SLC1A1P43005 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
SLC1A1P43005 ZNF215-202ENST00000414517 3257 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
SLC1A1P43005 ZNF702P-201ENST00000270443 2990 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SLC1A1P43005 CALCOCO2-203ENST00000416445 1438 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
SLC1A1P43005 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SLC1A1P43005 AC124804.1-202ENST00000583712 4315 ntTSL 5 BASIC9.47□□□□□ -0.89
SLC1A1P43005 DCAF1-203ENST00000504652 5951 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
SLC1A1P43005 LRRC37A11P-201ENST00000425901 3580 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SLC1A1P43005 CREM-207ENST00000356917 1895 ntTSL 2 BASIC9.47□□□□□ -0.89
SLC1A1P43005 ZNF641-202ENST00000448928 1856 ntTSL 2 BASIC9.47□□□□□ -0.89
SLC1A1P43005 AL445933.1-201ENST00000434240 2242 ntBASIC9.47□□□□□ -0.89
SLC1A1P43005 LIPH-201ENST00000296252 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SLC1A1P43005 CDH11-202ENST00000394156 6874 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SLC1A1P43005 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SLC1A1P43005 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
SLC1A1P43005 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
SLC1A1P43005 NTRK3-221ENST00000629765 2714 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SLC1A1P43005 NECAP1P1-201ENST00000320802 830 ntBASIC9.47□□□□□ -0.89
SLC1A1P43005 AC007036.2-201ENST00000415934 437 ntTSL 3 BASIC9.47□□□□□ -0.89
SLC1A1P43005 LINC02068-202ENST00000424941 563 ntTSL 2 BASIC9.47□□□□□ -0.89
SLC1A1P43005 AC020743.1-201ENST00000454877 767 ntTSL 3 BASIC9.47□□□□□ -0.89
SLC1A1P43005 RN7SL566P-201ENST00000467650 296 ntBASIC9.47□□□□□ -0.89
SLC1A1P43005 ARHGAP22-IT1-201ENST00000505718 470 ntTSL 3 BASIC9.47□□□□□ -0.89
SLC1A1P43005 AC131025.1-201ENST00000521756 588 ntTSL 3 BASIC9.47□□□□□ -0.89
SLC1A1P43005 ARHGDIB-207ENST00000541644 911 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
SLC1A1P43005 AC027288.3-203ENST00000553165 448 ntTSL 3 BASIC9.47□□□□□ -0.89
SLC1A1P43005 AL132639.1-201ENST00000553698 475 ntBASIC9.47□□□□□ -0.89
SLC1A1P43005 MIR4274-201ENST00000579577 91 ntBASIC9.47□□□□□ -0.89
SLC1A1P43005 HCG18-247ENST00000602698 573 ntTSL 3 BASIC9.47□□□□□ -0.89
SLC1A1P43005 Metazoa_SRP.162-201ENST00000613066 277 ntBASIC9.47□□□□□ -0.89
SLC1A1P43005 MIR8078-201ENST00000619811 84 ntBASIC9.47□□□□□ -0.89
SLC1A1P43005 LAMTOR5-AS1-236ENST00000626261 464 ntTSL 5 BASIC9.47□□□□□ -0.89
SLC1A1P43005 SRP9-205ENST00000626563 329 ntTSL 5 BASIC9.47□□□□□ -0.89
SLC1A1P43005 KRTAP9-6-201ENST00000391355 1303 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
SLC1A1P43005 NXF5-205ENST00000473265 1348 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
SLC1A1P43005 TMEM150C-204ENST00000515780 3296 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
SLC1A1P43005 CARF-201ENST00000320443 5209 ntTSL 2 BASIC9.47□□□□□ -0.89
SLC1A1P43005 IL17RD-202ENST00000320057 4474 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SLC1A1P43005 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC9.47□□□□□ -0.89
SLC1A1P43005 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SLC1A1P43005 OVGP1-201ENST00000369732 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SLC1A1P43005 NPY5R-201ENST00000338566 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SLC1A1P43005 C9orf153-201ENST00000339137 1845 ntAPPRIS P2 TSL 2 BASIC9.47□□□□□ -0.89
SLC1A1P43005 RBBP4-201ENST00000373485 1417 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SLC1A1P43005 VIPR1-AS1-201ENST00000452639 1435 ntTSL 5 BASIC9.47□□□□□ -0.89
SLC1A1P43005 RFT1-201ENST00000296292 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SLC1A1P43005 ADGRF4-203ENST00000371220 3075 ntTSL 5 BASIC9.47□□□□□ -0.89
SLC1A1P43005 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
SLC1A1P43005 CAPN3-201ENST00000318023 3172 ntTSL 5 BASIC9.47□□□□□ -0.89
SLC1A1P43005 DHRS9-201ENST00000357546 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SLC1A1P43005 FOXN3-202ENST00000345097 7832 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SLC1A1P43005 AP003025.2-202ENST00000414466 4335 ntTSL 2 BASIC9.46□□□□□ -0.89
SLC1A1P43005 TTC23-214ENST00000558663 2068 ntAPPRIS P2 TSL 2 BASIC9.46□□□□□ -0.89
SLC1A1P43005 FAM196A-202ENST00000522781 4403 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
SLC1A1P43005 ATF2-206ENST00000409635 2109 ntTSL 5 BASIC9.46□□□□□ -0.89
SLC1A1P43005 EIF4G3-202ENST00000356916 2179 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
SLC1A1P43005 MCTP1-205ENST00000505208 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
SLC1A1P43005 TMPRSS11B-201ENST00000332644 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SLC1A1P43005 AL008721.2-201ENST00000609475 3754 ntBASIC9.46□□□□□ -0.89
SLC1A1P43005 MYL12A-201ENST00000217652 1229 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SLC1A1P43005 IL13-201ENST00000304506 1283 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
SLC1A1P43005 NUP43-203ENST00000367404 1089 ntTSL 2 BASIC9.46□□□□□ -0.9
SLC1A1P43005 APH1B-203ENST00000380343 685 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SLC1A1P43005 TPM3P6-201ENST00000391998 742 ntBASIC9.46□□□□□ -0.9
SLC1A1P43005 CEBPZOS-201ENST00000392061 695 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
SLC1A1P43005 SLC25A26-203ENST00000413054 1096 ntTSL 5 BASIC9.46□□□□□ -0.9
SLC1A1P43005 AC008060.3-201ENST00000419225 534 ntTSL 4 BASIC9.46□□□□□ -0.9
SLC1A1P43005 AF130417.1-201ENST00000432412 478 ntTSL 3 BASIC9.46□□□□□ -0.9
SLC1A1P43005 AL023653.1-201ENST00000432513 326 ntTSL 5 BASIC9.46□□□□□ -0.9
SLC1A1P43005 LINC00385-201ENST00000435044 374 ntTSL 3 BASIC9.46□□□□□ -0.9
SLC1A1P43005 AC002076.1-201ENST00000435257 527 ntTSL 2 BASIC9.46□□□□□ -0.9
SLC1A1P43005 ADI1P1-201ENST00000438914 538 ntBASIC9.46□□□□□ -0.9
SLC1A1P43005 AL162253.1-201ENST00000443792 758 ntTSL 3 BASIC9.46□□□□□ -0.9
SLC1A1P43005 AL008627.1-201ENST00000446953 486 ntBASIC9.46□□□□□ -0.9
SLC1A1P43005 AC025572.1-201ENST00000472243 553 ntTSL 4 BASIC9.46□□□□□ -0.9
SLC1A1P43005 AC080013.1-205ENST00000477589 1087 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SLC1A1P43005 AC100861.2-201ENST00000511929 1125 ntTSL 3 BASIC9.46□□□□□ -0.9
SLC1A1P43005 AC022296.1-201ENST00000512176 682 ntBASIC9.46□□□□□ -0.9
SLC1A1P43005 TBCA-208ENST00000520361 446 ntTSL 2 BASIC9.46□□□□□ -0.9
SLC1A1P43005 AC018620.1-201ENST00000523233 379 ntBASIC9.46□□□□□ -0.9
SLC1A1P43005 AC023946.1-201ENST00000526867 594 ntTSL 3 BASIC9.46□□□□□ -0.9
SLC1A1P43005 HNRNPKP3-202ENST00000533565 589 ntTSL 4 BASIC9.46□□□□□ -0.9
SLC1A1P43005 LINC02359-201ENST00000545642 643 ntTSL 3 BASIC9.46□□□□□ -0.9
SLC1A1P43005 RPEP6-201ENST00000546228 626 ntBASIC9.46□□□□□ -0.9
SLC1A1P43005 AC073612.1-201ENST00000548802 771 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms