Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ZNF252P-203ENST00000527222 876 ntTSL 2 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 OR4B2P-201ENST00000527724 882 ntBASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 AC073863.1-201ENST00000550206 570 ntTSL 4 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 AL137779.1-201ENST00000556205 599 ntTSL 3 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 NPC2-209ENST00000557510 1029 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 CAPN3-219ENST00000569136 1029 ntTSL 2 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 MIR3150B-201ENST00000580142 86 ntBASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 AC103810.1-203ENST00000583052 599 ntTSL 4 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 AL627309.1-205ENST00000610542 723 ntTSL 5 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 GLDN-202ENST00000396399 4584 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 CHEK2-206ENST00000402731 1545 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 RUFY3-204ENST00000502653 2342 ntTSL 2 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 CYP4A11-202ENST00000371904 1760 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 RBM26-AS1-201ENST00000456602 1756 ntTSL 2 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 NOL10-202ENST00000381685 2589 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 ZNF347-207ENST00000601469 2812 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 AL138831.3-201ENST00000623656 1458 ntBASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 SERAC1-205ENST00000607000 2284 ntTSL 2 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 DDR2-201ENST00000367921 3096 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 ACSM6-202ENST00000341686 1712 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 TBX22-201ENST00000373294 2249 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 TUBB1-201ENST00000217133 3496 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 NCOA4-207ENST00000585132 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 MCTP1-204ENST00000505078 2629 ntTSL 2 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 FNDC3A-206ENST00000541916 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 USP4-202ENST00000351842 3222 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 RPAP1-202ENST00000561603 3906 ntTSL 5 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 C1orf198-202ENST00000427697 3666 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 CDCA8-202ENST00000373055 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 PARL-212ENST00000639100 1513 ntTSL 5 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 CALD1-201ENST00000361675 3612 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 SPACA5B-201ENST00000304270 595 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 KRTAP20-3-201ENST00000382826 273 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 NDUFA3-202ENST00000391762 435 ntTSL 5 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 AP002761.1-201ENST00000400985 262 ntTSL 3 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 FYTTD1P1-201ENST00000424250 921 ntBASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 AL161447.1-201ENST00000427811 230 ntBASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 FAM9B-203ENST00000428477 1064 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 AL591074.1-201ENST00000437012 797 ntTSL 5 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 AL358976.1-201ENST00000437555 392 ntBASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 AC016683.1-201ENST00000446590 559 ntTSL 4 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 PRDX2P4-201ENST00000447134 600 ntBASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 AL663058.1-201ENST00000453379 353 ntBASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 RN7SL420P-201ENST00000463843 298 ntBASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 RN7SL305P-201ENST00000464862 281 ntBASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 AC080013.1-205ENST00000477589 1087 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 RN7SL316P-201ENST00000483452 272 ntBASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 FXYD6P3-201ENST00000495569 285 ntBASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 RPL29P22-201ENST00000498718 459 ntBASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 AC106795.1-207ENST00000507037 1123 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 IGHVII-15-1-201ENST00000517931 220 ntBASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 AC120036.4-201ENST00000521874 256 ntBASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 AC022034.4-201ENST00000521930 469 ntTSL 3 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 AC025437.4-201ENST00000522975 681 ntTSL 3 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 RPS3-207ENST00000526608 710 ntTSL 5 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 TMIGD1-202ENST00000538566 1124 ntTSL 2 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 CACNA1C-AS2-201ENST00000545526 609 ntTSL 2 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 PRR13-210ENST00000551003 1009 ntAPPRIS ALT2 TSL 3 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 AL157955.2-202ENST00000553921 467 ntTSL 3 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 AL357153.2-201ENST00000556646 565 ntTSL 4 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 AC024270.3-201ENST00000565513 396 ntTSL 3 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 AC119868.2-201ENST00000583991 432 ntTSL 3 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 AL138999.1-201ENST00000612824 501 ntBASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 ATF3-210ENST00000613104 581 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 FRG1HP-203ENST00000615326 593 ntTSL 3 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 SYN3-213ENST00000619146 561 ntTSL 5 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 AC016866.3-201ENST00000624037 714 ntBASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 AP000280.1-201ENST00000624800 832 ntBASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 AC136603.1-201ENST00000625152 767 ntBASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 AL590644.1-202ENST00000634972 590 ntTSL 3 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 SLC19A3-201ENST00000258403 3105 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 FKBP14-201ENST00000222803 4960 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 SPIN3-211ENST00000638712 4286 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 LINC01354-202ENST00000435574 2860 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 PRMT3-203ENST00000437750 1736 ntTSL 2 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 MTF2-214ENST00000545708 4046 ntTSL 2 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 SOCS4-202ENST00000395472 6779 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 HKR1-213ENST00000589392 2152 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 BHLHB9-202ENST00000372735 5130 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 AGBL4-202ENST00000371836 1454 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 ENTPD1-203ENST00000371207 1903 ntTSL 2 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 ERBB3-203ENST00000415288 4353 ntTSL 2 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 TRIM52-205ENST00000611618 3466 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 PPIL2-203ENST00000406385 3875 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 RABGAP1-202ENST00000373647 4997 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 RBBP4-201ENST00000373485 1417 ntAPPRIS ALT1 TSL 1 (best) BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 ATP1B2-201ENST00000250111 3153 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms