Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC092803.1-201ENST00000439570 359 ntTSL 3 BASIC9.5□□□□□ -0.89
SLC1A1P43005 RIIAD1-206ENST00000479191 449 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
SLC1A1P43005 PGAM1P9-201ENST00000503887 755 ntBASIC9.5□□□□□ -0.89
SLC1A1P43005 AP002802.1-201ENST00000526154 342 ntTSL 3 BASIC9.5□□□□□ -0.89
SLC1A1P43005 NUPL2-212ENST00000548367 249 ntTSL 5 BASIC9.5□□□□□ -0.89
SLC1A1P43005 AC005324.1-203ENST00000580194 541 ntTSL 5 BASIC9.5□□□□□ -0.89
SLC1A1P43005 AC008687.3-201ENST00000599209 598 ntBASIC9.5□□□□□ -0.89
SLC1A1P43005 AC097376.2-203ENST00000608663 431 ntTSL 3 BASIC9.5□□□□□ -0.89
SLC1A1P43005 AL669942.1-201ENST00000611307 713 ntTSL 5 BASIC9.5□□□□□ -0.89
SLC1A1P43005 AC009152.1-201ENST00000618290 556 ntBASIC9.5□□□□□ -0.89
SLC1A1P43005 RN7SL650P-201ENST00000619902 299 ntBASIC9.5□□□□□ -0.89
SLC1A1P43005 AC011389.3-201ENST00000623273 999 ntBASIC9.5□□□□□ -0.89
SLC1A1P43005 AL031291.1-201ENST00000641979 742 ntBASIC9.5□□□□□ -0.89
SLC1A1P43005 ESR1-206ENST00000427531 5436 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SLC1A1P43005 AC036108.3-201ENST00000564527 2677 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SLC1A1P43005 MARCH1-214ENST00000514618 3903 ntTSL 5 BASIC9.5□□□□□ -0.89
SLC1A1P43005 AMPH-201ENST00000325590 3145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
SLC1A1P43005 RNF145-209ENST00000520638 2340 ntTSL 2 BASIC9.5□□□□□ -0.89
SLC1A1P43005 ZNF207-204ENST00000394673 2124 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
SLC1A1P43005 SERPINB2-201ENST00000299502 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SLC1A1P43005 FAM120B-201ENST00000476287 5155 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
SLC1A1P43005 AP002765.1-201ENST00000528675 1507 ntBASIC9.5□□□□□ -0.89
SLC1A1P43005 VPS8-207ENST00000436792 5011 ntAPPRIS ALT1 TSL 2 BASIC9.5□□□□□ -0.89
SLC1A1P43005 TNS1-202ENST00000310858 1792 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SLC1A1P43005 ZNF613-202ENST00000391794 2225 ntTSL 2 BASIC9.5□□□□□ -0.89
SLC1A1P43005 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SLC1A1P43005 SLC36A3-201ENST00000335230 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SLC1A1P43005 RAD54L-201ENST00000371975 3108 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SLC1A1P43005 NPC2-203ENST00000541064 1436 ntTSL 2 BASIC9.49□□□□□ -0.89
SLC1A1P43005 HEPACAM2-204ENST00000453812 1869 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
SLC1A1P43005 TYW5-201ENST00000354611 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SLC1A1P43005 CAB39L-202ENST00000355854 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SLC1A1P43005 ARMC3-201ENST00000298032 2811 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
SLC1A1P43005 LINC01354-202ENST00000435574 2860 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SLC1A1P43005 DECR1-201ENST00000220764 1207 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SLC1A1P43005 RIPPLY1-201ENST00000276173 1172 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
SLC1A1P43005 S100A8-201ENST00000368732 495 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
SLC1A1P43005 LST1-209ENST00000376096 565 ntTSL 2 BASIC9.49□□□□□ -0.89
SLC1A1P43005 AC079834.1-201ENST00000414016 421 ntBASIC9.49□□□□□ -0.89
SLC1A1P43005 CABYR-205ENST00000415309 824 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SLC1A1P43005 AL022313.3-201ENST00000433970 405 ntTSL 2 BASIC9.49□□□□□ -0.89
SLC1A1P43005 AL157392.2-201ENST00000449462 474 ntTSL 3 BASIC9.49□□□□□ -0.89
SLC1A1P43005 REG1CP-207ENST00000450249 569 ntTSL 4 BASIC9.49□□□□□ -0.89
SLC1A1P43005 CSH1-203ENST00000453363 632 ntTSL 5 BASIC9.49□□□□□ -0.89
SLC1A1P43005 LINC00900-202ENST00000501294 982 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SLC1A1P43005 AC146949.1-201ENST00000505946 423 ntBASIC9.49□□□□□ -0.89
SLC1A1P43005 AC146944.1-201ENST00000508439 418 ntBASIC9.49□□□□□ -0.89
SLC1A1P43005 ZBED3-AS1-215ENST00000514905 1156 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SLC1A1P43005 IGLV1-41-201ENST00000519790 406 ntBASIC9.49□□□□□ -0.89
SLC1A1P43005 IGHV3-50-201ENST00000522107 317 ntBASIC9.49□□□□□ -0.89
SLC1A1P43005 AL355922.3-201ENST00000556341 578 ntBASIC9.49□□□□□ -0.89
SLC1A1P43005 LINC02349-201ENST00000561386 963 ntTSL 2 BASIC9.49□□□□□ -0.89
SLC1A1P43005 AC079322.1-201ENST00000568345 1135 ntBASIC9.49□□□□□ -0.89
SLC1A1P43005 AC004253.2-201ENST00000585025 397 ntTSL 3 BASIC9.49□□□□□ -0.89
SLC1A1P43005 FAM95B1-204ENST00000586273 798 ntTSL 5 BASIC9.49□□□□□ -0.89
SLC1A1P43005 FAM95B1-207ENST00000589112 768 ntTSL 5 BASIC9.49□□□□□ -0.89
SLC1A1P43005 AC010615.2-206ENST00000593653 556 ntTSL 3 BASIC9.49□□□□□ -0.89
SLC1A1P43005 AC104958.2-201ENST00000605955 1141 ntBASIC9.49□□□□□ -0.89
SLC1A1P43005 Metazoa_SRP.148-201ENST00000614489 291 ntBASIC9.49□□□□□ -0.89
SLC1A1P43005 DRICH1-202ENST00000614553 687 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SLC1A1P43005 MAPT-AS1-204ENST00000634876 3602 ntTSL 5 BASIC9.49□□□□□ -0.89
SLC1A1P43005 RASSF6-201ENST00000307439 5994 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SLC1A1P43005 AC002464.1-201ENST00000569685 1530 ntBASIC9.49□□□□□ -0.89
SLC1A1P43005 LDB2-202ENST00000441778 2476 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SLC1A1P43005 EIF4BP5-201ENST00000567338 1795 ntBASIC9.49□□□□□ -0.89
SLC1A1P43005 RSU1-203ENST00000377921 3919 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SLC1A1P43005 CDCA3-204ENST00000535406 1327 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
SLC1A1P43005 SAR1A-205ENST00000373242 5981 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
SLC1A1P43005 CCDC65-201ENST00000266984 2084 ntTSL 5 BASIC9.49□□□□□ -0.89
SLC1A1P43005 AP003027.1-202ENST00000366160 2076 ntBASIC9.49□□□□□ -0.89
SLC1A1P43005 TBC1D8B-206ENST00000481617 4098 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SLC1A1P43005 CD28-201ENST00000324106 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SLC1A1P43005 CD36-209ENST00000435819 2365 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
SLC1A1P43005 AC124017.1-202ENST00000506950 1616 ntTSL 2 BASIC9.49□□□□□ -0.89
SLC1A1P43005 LINC00927-203ENST00000558913 2878 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SLC1A1P43005 MED7-201ENST00000286317 2402 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SLC1A1P43005 FAM193A-210ENST00000545951 3987 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
SLC1A1P43005 MCM8-203ENST00000378886 3835 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SLC1A1P43005 ATXN7L1-202ENST00000419735 5417 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SLC1A1P43005 ADGRF4-202ENST00000327753 3074 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
SLC1A1P43005 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SLC1A1P43005 LCA5L-202ENST00000358268 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SLC1A1P43005 DPH3-204ENST00000488423 3131 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SLC1A1P43005 MTMR2-204ENST00000409459 3420 ntTSL 5 BASIC9.48□□□□□ -0.89
SLC1A1P43005 OR2S2-201ENST00000341959 1047 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
SLC1A1P43005 RNA5SP209-201ENST00000411237 97 ntBASIC9.48□□□□□ -0.89
SLC1A1P43005 AC092100.1-203ENST00000421513 653 ntTSL 3 BASIC9.48□□□□□ -0.89
SLC1A1P43005 AC020595.1-201ENST00000456446 533 ntTSL 3 BASIC9.48□□□□□ -0.89
SLC1A1P43005 C3orf67-AS1-201ENST00000463703 562 ntTSL 4 BASIC9.48□□□□□ -0.89
SLC1A1P43005 RN7SL586P-201ENST00000479137 296 ntBASIC9.48□□□□□ -0.89
SLC1A1P43005 RPL7AP11-201ENST00000486538 799 ntBASIC9.48□□□□□ -0.89
SLC1A1P43005 AC100771.1-201ENST00000496450 279 ntBASIC9.48□□□□□ -0.89
SLC1A1P43005 AC026746.1-201ENST00000505623 2105 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SLC1A1P43005 LINC01411-202ENST00000506862 744 ntTSL 3 BASIC9.48□□□□□ -0.89
SLC1A1P43005 AARSP1-201ENST00000514795 453 ntBASIC9.48□□□□□ -0.89
SLC1A1P43005 AC087321.1-201ENST00000539105 460 ntTSL 3 BASIC9.48□□□□□ -0.89
SLC1A1P43005 AL352977.1-201ENST00000553464 453 ntTSL 5 BASIC9.48□□□□□ -0.89
SLC1A1P43005 FAM174B-204ENST00000555064 621 ntAPPRIS ALT2 TSL 4 BASIC9.48□□□□□ -0.89
SLC1A1P43005 AC009414.2-201ENST00000565283 366 ntBASIC9.48□□□□□ -0.89
SLC1A1P43005 ZNF93-205ENST00000591366 590 ntTSL 3 BASIC9.48□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms