Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
DDX49Q9Y6V7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
DDX49Q9Y6V7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
DDX49Q9Y6V7 OR7E47P-201ENST00000546390 1422 ntBASIC24.51■■□□□ 1.51
DDX49Q9Y6V7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
DDX49Q9Y6V7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC24.51■■□□□ 1.51
DDX49Q9Y6V7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC24.51■■□□□ 1.51
DDX49Q9Y6V7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
DDX49Q9Y6V7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
DDX49Q9Y6V7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC24.5■■□□□ 1.51
DDX49Q9Y6V7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
DDX49Q9Y6V7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC24.5■■□□□ 1.51
DDX49Q9Y6V7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
DDX49Q9Y6V7 UBE2DNL-204ENST00000602536 740 ntBASIC24.5■■□□□ 1.51
DDX49Q9Y6V7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC24.5■■□□□ 1.51
DDX49Q9Y6V7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
DDX49Q9Y6V7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC24.5■■□□□ 1.51
DDX49Q9Y6V7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC24.5■■□□□ 1.51
DDX49Q9Y6V7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC24.5■■□□□ 1.51
DDX49Q9Y6V7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
DDX49Q9Y6V7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC24.5■■□□□ 1.51
DDX49Q9Y6V7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC24.5■■□□□ 1.51
DDX49Q9Y6V7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
DDX49Q9Y6V7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC24.49■■□□□ 1.51
DDX49Q9Y6V7 GABARAPL3-202ENST00000624044 1851 ntBASIC24.49■■□□□ 1.51
DDX49Q9Y6V7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
DDX49Q9Y6V7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC24.49■■□□□ 1.51
DDX49Q9Y6V7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
DDX49Q9Y6V7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
DDX49Q9Y6V7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC24.49■■□□□ 1.51
DDX49Q9Y6V7 AC006970.2-201ENST00000450065 779 ntBASIC24.49■■□□□ 1.51
DDX49Q9Y6V7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.49■■□□□ 1.51
DDX49Q9Y6V7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.49■■□□□ 1.51
DDX49Q9Y6V7 AL050303.2-201ENST00000619798 666 ntBASIC24.49■■□□□ 1.51
DDX49Q9Y6V7 AC009237.3-201ENST00000393279 1427 ntBASIC24.49■■□□□ 1.51
DDX49Q9Y6V7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
DDX49Q9Y6V7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
DDX49Q9Y6V7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
DDX49Q9Y6V7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
DDX49Q9Y6V7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
DDX49Q9Y6V7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
DDX49Q9Y6V7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
DDX49Q9Y6V7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC24.48■■□□□ 1.51
DDX49Q9Y6V7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
DDX49Q9Y6V7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
DDX49Q9Y6V7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
DDX49Q9Y6V7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
DDX49Q9Y6V7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC24.48■■□□□ 1.51
DDX49Q9Y6V7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
DDX49Q9Y6V7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
DDX49Q9Y6V7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC24.48■■□□□ 1.51
DDX49Q9Y6V7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
DDX49Q9Y6V7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
DDX49Q9Y6V7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC24.48■■□□□ 1.51
DDX49Q9Y6V7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC24.48■■□□□ 1.51
DDX49Q9Y6V7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
DDX49Q9Y6V7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC24.47■■□□□ 1.51
DDX49Q9Y6V7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
DDX49Q9Y6V7 AP005212.1-201ENST00000581547 1997 ntBASIC24.47■■□□□ 1.51
DDX49Q9Y6V7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
DDX49Q9Y6V7 AP004607.7-201ENST00000527152 1677 ntBASIC24.47■■□□□ 1.51
DDX49Q9Y6V7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC24.47■■□□□ 1.51
DDX49Q9Y6V7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
DDX49Q9Y6V7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.47■■□□□ 1.51
DDX49Q9Y6V7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
DDX49Q9Y6V7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
DDX49Q9Y6V7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
DDX49Q9Y6V7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
DDX49Q9Y6V7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC24.47■■□□□ 1.51
DDX49Q9Y6V7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC24.47■■□□□ 1.51
DDX49Q9Y6V7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
DDX49Q9Y6V7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC24.47■■□□□ 1.51
DDX49Q9Y6V7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
DDX49Q9Y6V7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC24.47■■□□□ 1.51
DDX49Q9Y6V7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
DDX49Q9Y6V7 AC073314.1-201ENST00000568729 2216 ntBASIC24.47■■□□□ 1.51
DDX49Q9Y6V7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
DDX49Q9Y6V7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
DDX49Q9Y6V7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC24.47■■□□□ 1.51
DDX49Q9Y6V7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
DDX49Q9Y6V7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
DDX49Q9Y6V7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
DDX49Q9Y6V7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC24.46■■□□□ 1.51
DDX49Q9Y6V7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
DDX49Q9Y6V7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
DDX49Q9Y6V7 AL355802.2-201ENST00000402069 882 ntBASIC24.46■■□□□ 1.51
DDX49Q9Y6V7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
DDX49Q9Y6V7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
DDX49Q9Y6V7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC24.46■■□□□ 1.51
DDX49Q9Y6V7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
DDX49Q9Y6V7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC24.46■■□□□ 1.51
DDX49Q9Y6V7 AFG3L1P-217ENST00000557444 2447 ntBASIC24.46■■□□□ 1.51
DDX49Q9Y6V7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC24.46■■□□□ 1.51
DDX49Q9Y6V7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC24.46■■□□□ 1.51
DDX49Q9Y6V7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
DDX49Q9Y6V7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
DDX49Q9Y6V7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
DDX49Q9Y6V7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC24.46■■□□□ 1.51
DDX49Q9Y6V7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC24.46■■□□□ 1.51
DDX49Q9Y6V7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms