Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
SCN10AQ9Y5Y9 BX088651.1-201ENST00000540551 451 ntBASIC22.69■■□□□ 1.22
SCN10AQ9Y5Y9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC22.69■■□□□ 1.22
SCN10AQ9Y5Y9 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SCN10AQ9Y5Y9 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.69■■□□□ 1.22
SCN10AQ9Y5Y9 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SCN10AQ9Y5Y9 AL023875.1-201ENST00000640777 796 ntBASIC22.69■■□□□ 1.22
SCN10AQ9Y5Y9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
SCN10AQ9Y5Y9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
SCN10AQ9Y5Y9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SCN10AQ9Y5Y9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SCN10AQ9Y5Y9 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC22.68■■□□□ 1.22
SCN10AQ9Y5Y9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
SCN10AQ9Y5Y9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SCN10AQ9Y5Y9 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.68■■□□□ 1.22
SCN10AQ9Y5Y9 AL355075.4-201ENST00000554988 638 ntBASIC22.68■■□□□ 1.22
SCN10AQ9Y5Y9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC22.68■■□□□ 1.22
SCN10AQ9Y5Y9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.68■■□□□ 1.22
SCN10AQ9Y5Y9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
SCN10AQ9Y5Y9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.68■■□□□ 1.22
SCN10AQ9Y5Y9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.68■■□□□ 1.22
SCN10AQ9Y5Y9 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SCN10AQ9Y5Y9 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
SCN10AQ9Y5Y9 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
SCN10AQ9Y5Y9 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
SCN10AQ9Y5Y9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SCN10AQ9Y5Y9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.67■■□□□ 1.22
SCN10AQ9Y5Y9 LINC01023-201ENST00000606054 436 ntBASIC22.67■■□□□ 1.22
SCN10AQ9Y5Y9 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SCN10AQ9Y5Y9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SCN10AQ9Y5Y9 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SCN10AQ9Y5Y9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SCN10AQ9Y5Y9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SCN10AQ9Y5Y9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.67■■□□□ 1.22
SCN10AQ9Y5Y9 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SCN10AQ9Y5Y9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
SCN10AQ9Y5Y9 TSPY7P-201ENST00000431358 1114 ntBASIC22.67■■□□□ 1.22
SCN10AQ9Y5Y9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC22.67■■□□□ 1.22
SCN10AQ9Y5Y9 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SCN10AQ9Y5Y9 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
SCN10AQ9Y5Y9 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
SCN10AQ9Y5Y9 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SCN10AQ9Y5Y9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SCN10AQ9Y5Y9 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SCN10AQ9Y5Y9 ABHD17AP6-201ENST00000458502 1044 ntBASIC22.66■■□□□ 1.22
SCN10AQ9Y5Y9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC22.66■■□□□ 1.22
SCN10AQ9Y5Y9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SCN10AQ9Y5Y9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SCN10AQ9Y5Y9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SCN10AQ9Y5Y9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.66■■□□□ 1.22
SCN10AQ9Y5Y9 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SCN10AQ9Y5Y9 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SCN10AQ9Y5Y9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SCN10AQ9Y5Y9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
SCN10AQ9Y5Y9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SCN10AQ9Y5Y9 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SCN10AQ9Y5Y9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SCN10AQ9Y5Y9 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.65■■□□□ 1.22
SCN10AQ9Y5Y9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
SCN10AQ9Y5Y9 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SCN10AQ9Y5Y9 KRASP1-201ENST00000407852 552 ntBASIC22.65■■□□□ 1.22
SCN10AQ9Y5Y9 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
SCN10AQ9Y5Y9 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
SCN10AQ9Y5Y9 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SCN10AQ9Y5Y9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SCN10AQ9Y5Y9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SCN10AQ9Y5Y9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.65■■□□□ 1.22
SCN10AQ9Y5Y9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
SCN10AQ9Y5Y9 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC22.65■■□□□ 1.22
SCN10AQ9Y5Y9 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SCN10AQ9Y5Y9 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SCN10AQ9Y5Y9 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC22.65■■□□□ 1.22
SCN10AQ9Y5Y9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC22.65■■□□□ 1.22
SCN10AQ9Y5Y9 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC22.64■■□□□ 1.22
SCN10AQ9Y5Y9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.64■■□□□ 1.22
SCN10AQ9Y5Y9 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SCN10AQ9Y5Y9 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.64■■□□□ 1.21
SCN10AQ9Y5Y9 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SCN10AQ9Y5Y9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.64■■□□□ 1.21
SCN10AQ9Y5Y9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
SCN10AQ9Y5Y9 AC110285.5-201ENST00000611501 352 ntBASIC22.64■■□□□ 1.21
SCN10AQ9Y5Y9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SCN10AQ9Y5Y9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SCN10AQ9Y5Y9 GUSBP5-202ENST00000510805 1989 ntBASIC22.64■■□□□ 1.21
SCN10AQ9Y5Y9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.64■■□□□ 1.21
SCN10AQ9Y5Y9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SCN10AQ9Y5Y9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SCN10AQ9Y5Y9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SCN10AQ9Y5Y9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SCN10AQ9Y5Y9 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SCN10AQ9Y5Y9 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
SCN10AQ9Y5Y9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC22.63■■□□□ 1.21
SCN10AQ9Y5Y9 RARRES2P10-201ENST00000564312 460 ntBASIC22.63■■□□□ 1.21
SCN10AQ9Y5Y9 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
SCN10AQ9Y5Y9 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SCN10AQ9Y5Y9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22.63■■□□□ 1.21
SCN10AQ9Y5Y9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.63■■□□□ 1.21
SCN10AQ9Y5Y9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SCN10AQ9Y5Y9 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SCN10AQ9Y5Y9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms