Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.39■□□□□ 0.21
LSM4Q9Y4Z0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
LSM4Q9Y4Z0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
LSM4Q9Y4Z0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LSM4Q9Y4Z0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LSM4Q9Y4Z0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.39■□□□□ 0.21
LSM4Q9Y4Z0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LSM4Q9Y4Z0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.39■□□□□ 0.21
LSM4Q9Y4Z0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.39■□□□□ 0.21
LSM4Q9Y4Z0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LSM4Q9Y4Z0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LSM4Q9Y4Z0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.39■□□□□ 0.21
LSM4Q9Y4Z0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
LSM4Q9Y4Z0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSM4Q9Y4Z0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSM4Q9Y4Z0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.39■□□□□ 0.21
LSM4Q9Y4Z0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSM4Q9Y4Z0 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.39■□□□□ 0.21
LSM4Q9Y4Z0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSM4Q9Y4Z0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LSM4Q9Y4Z0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.39■□□□□ 0.21
LSM4Q9Y4Z0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.39■□□□□ 0.21
LSM4Q9Y4Z0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSM4Q9Y4Z0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSM4Q9Y4Z0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LSM4Q9Y4Z0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSM4Q9Y4Z0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
LSM4Q9Y4Z0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.38■□□□□ 0.21
LSM4Q9Y4Z0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.38■□□□□ 0.21
LSM4Q9Y4Z0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.38■□□□□ 0.21
LSM4Q9Y4Z0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.38■□□□□ 0.21
LSM4Q9Y4Z0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.38■□□□□ 0.21
LSM4Q9Y4Z0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.38■□□□□ 0.21
LSM4Q9Y4Z0 KRT18P61-201ENST00000585825 1298 ntBASIC16.38■□□□□ 0.21
LSM4Q9Y4Z0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.38■□□□□ 0.21
LSM4Q9Y4Z0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSM4Q9Y4Z0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LSM4Q9Y4Z0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSM4Q9Y4Z0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.38■□□□□ 0.21
LSM4Q9Y4Z0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSM4Q9Y4Z0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.38■□□□□ 0.21
LSM4Q9Y4Z0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSM4Q9Y4Z0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSM4Q9Y4Z0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.38■□□□□ 0.21
LSM4Q9Y4Z0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LSM4Q9Y4Z0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LSM4Q9Y4Z0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.38■□□□□ 0.21
LSM4Q9Y4Z0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LSM4Q9Y4Z0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSM4Q9Y4Z0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LSM4Q9Y4Z0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.37■□□□□ 0.21
LSM4Q9Y4Z0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSM4Q9Y4Z0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.37■□□□□ 0.21
LSM4Q9Y4Z0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LSM4Q9Y4Z0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LSM4Q9Y4Z0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LSM4Q9Y4Z0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
LSM4Q9Y4Z0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LSM4Q9Y4Z0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSM4Q9Y4Z0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSM4Q9Y4Z0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.37■□□□□ 0.21
LSM4Q9Y4Z0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LSM4Q9Y4Z0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.37■□□□□ 0.21
LSM4Q9Y4Z0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.37■□□□□ 0.21
LSM4Q9Y4Z0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.37■□□□□ 0.21
LSM4Q9Y4Z0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSM4Q9Y4Z0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSM4Q9Y4Z0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
LSM4Q9Y4Z0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.37■□□□□ 0.21
LSM4Q9Y4Z0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.37■□□□□ 0.21
LSM4Q9Y4Z0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LSM4Q9Y4Z0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSM4Q9Y4Z0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
LSM4Q9Y4Z0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LSM4Q9Y4Z0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 AC016769.1-201ENST00000409132 1010 ntBASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 SMUG1P1-201ENST00000590640 811 ntBASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 TPRG1LP1-201ENST00000598702 760 ntBASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 RAP2CP1-201ENST00000605103 478 ntBASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.36■□□□□ 0.21
LSM4Q9Y4Z0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms