Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
NPIPA1Q9UND3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPIPA1Q9UND3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NPIPA1Q9UND3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPIPA1Q9UND3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
NPIPA1Q9UND3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
NPIPA1Q9UND3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NPIPA1Q9UND3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
NPIPA1Q9UND3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPIPA1Q9UND3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
NPIPA1Q9UND3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NPIPA1Q9UND3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.89■□□□□ 0.61
NPIPA1Q9UND3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.89■□□□□ 0.61
NPIPA1Q9UND3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPIPA1Q9UND3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPIPA1Q9UND3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
NPIPA1Q9UND3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
NPIPA1Q9UND3 AC245052.3-201ENST00000450182 901 ntBASIC18.89■□□□□ 0.61
NPIPA1Q9UND3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
NPIPA1Q9UND3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.89■□□□□ 0.61
NPIPA1Q9UND3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.89■□□□□ 0.61
NPIPA1Q9UND3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
NPIPA1Q9UND3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.89■□□□□ 0.61
NPIPA1Q9UND3 AC083880.1-201ENST00000608266 535 ntBASIC18.89■□□□□ 0.61
NPIPA1Q9UND3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NPIPA1Q9UND3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.89■□□□□ 0.61
NPIPA1Q9UND3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.89■□□□□ 0.61
NPIPA1Q9UND3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPIPA1Q9UND3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPIPA1Q9UND3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
NPIPA1Q9UND3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPA1Q9UND3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.88■□□□□ 0.61
NPIPA1Q9UND3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.88■□□□□ 0.61
NPIPA1Q9UND3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPA1Q9UND3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.88■□□□□ 0.61
NPIPA1Q9UND3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPA1Q9UND3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPA1Q9UND3 LSM12P1-201ENST00000411836 588 ntBASIC18.88■□□□□ 0.61
NPIPA1Q9UND3 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.88■□□□□ 0.61
NPIPA1Q9UND3 DUSP5P2-201ENST00000426873 1033 ntBASIC18.88■□□□□ 0.61
NPIPA1Q9UND3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.88■□□□□ 0.61
NPIPA1Q9UND3 AC091874.3-201ENST00000512672 1195 ntBASIC18.88■□□□□ 0.61
NPIPA1Q9UND3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.88■□□□□ 0.61
NPIPA1Q9UND3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.88■□□□□ 0.61
NPIPA1Q9UND3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPA1Q9UND3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
NPIPA1Q9UND3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPA1Q9UND3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
NPIPA1Q9UND3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPA1Q9UND3 FEM1AP4-201ENST00000443167 1987 ntBASIC18.88■□□□□ 0.61
NPIPA1Q9UND3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.88■□□□□ 0.61
NPIPA1Q9UND3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPA1Q9UND3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.88■□□□□ 0.61
NPIPA1Q9UND3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.87■□□□□ 0.61
NPIPA1Q9UND3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NPIPA1Q9UND3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPIPA1Q9UND3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPIPA1Q9UND3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NPIPA1Q9UND3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NPIPA1Q9UND3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NPIPA1Q9UND3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
NPIPA1Q9UND3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
NPIPA1Q9UND3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPIPA1Q9UND3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NPIPA1Q9UND3 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.87■□□□□ 0.61
NPIPA1Q9UND3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.87■□□□□ 0.61
NPIPA1Q9UND3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.87■□□□□ 0.61
NPIPA1Q9UND3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NPIPA1Q9UND3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.87■□□□□ 0.61
NPIPA1Q9UND3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.87■□□□□ 0.61
NPIPA1Q9UND3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.87■□□□□ 0.61
NPIPA1Q9UND3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.87■□□□□ 0.61
NPIPA1Q9UND3 AC008687.6-201ENST00000596318 630 ntBASIC18.87■□□□□ 0.61
NPIPA1Q9UND3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
NPIPA1Q9UND3 ITM2C-210ENST00000620962 501 ntBASIC18.87■□□□□ 0.61
NPIPA1Q9UND3 MYC-209ENST00000641252 345 ntBASIC18.87■□□□□ 0.61
NPIPA1Q9UND3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
NPIPA1Q9UND3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPIPA1Q9UND3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPA1Q9UND3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPA1Q9UND3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPA1Q9UND3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.86■□□□□ 0.61
NPIPA1Q9UND3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
NPIPA1Q9UND3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
NPIPA1Q9UND3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPA1Q9UND3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
NPIPA1Q9UND3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPA1Q9UND3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPA1Q9UND3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.86■□□□□ 0.61
NPIPA1Q9UND3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPA1Q9UND3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPA1Q9UND3 AC005229.4-201ENST00000610085 2198 ntBASIC18.86■□□□□ 0.61
NPIPA1Q9UND3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPA1Q9UND3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPA1Q9UND3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPA1Q9UND3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPA1Q9UND3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPA1Q9UND3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPA1Q9UND3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPA1Q9UND3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms