Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGC3Q9UN70 AL157384.1-201ENST00000445995 2473 ntBASIC21.69■■□□□ 1.06
PCDHGC3Q9UN70 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGC3Q9UN70 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGC3Q9UN70 GABARAPL3-202ENST00000624044 1851 ntBASIC21.69■■□□□ 1.06
PCDHGC3Q9UN70 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDHGC3Q9UN70 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGC3Q9UN70 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHGC3Q9UN70 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGC3Q9UN70 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGC3Q9UN70 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PCDHGC3Q9UN70 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.69■■□□□ 1.06
PCDHGC3Q9UN70 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDHGC3Q9UN70 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDHGC3Q9UN70 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PCDHGC3Q9UN70 AC073111.5-205ENST00000641717 521 ntBASIC21.69■■□□□ 1.06
PCDHGC3Q9UN70 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGC3Q9UN70 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGC3Q9UN70 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHGC3Q9UN70 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGC3Q9UN70 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGC3Q9UN70 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGC3Q9UN70 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGC3Q9UN70 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGC3Q9UN70 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGC3Q9UN70 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGC3Q9UN70 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PCDHGC3Q9UN70 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PCDHGC3Q9UN70 CYP2T1P-201ENST00000432607 1285 ntBASIC21.68■■□□□ 1.06
PCDHGC3Q9UN70 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.68■■□□□ 1.06
PCDHGC3Q9UN70 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.68■■□□□ 1.06
PCDHGC3Q9UN70 AC100791.3-201ENST00000617619 330 ntBASIC21.68■■□□□ 1.06
PCDHGC3Q9UN70 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PCDHGC3Q9UN70 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHGC3Q9UN70 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHGC3Q9UN70 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGC3Q9UN70 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHGC3Q9UN70 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGC3Q9UN70 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PCDHGC3Q9UN70 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGC3Q9UN70 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGC3Q9UN70 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHGC3Q9UN70 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGC3Q9UN70 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGC3Q9UN70 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGC3Q9UN70 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
PCDHGC3Q9UN70 CYP21A1P-202ENST00000354927 1481 ntBASIC21.67■■□□□ 1.06
PCDHGC3Q9UN70 KRT8P36-201ENST00000489121 1440 ntBASIC21.67■■□□□ 1.06
PCDHGC3Q9UN70 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDHGC3Q9UN70 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDHGC3Q9UN70 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGC3Q9UN70 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHGC3Q9UN70 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.67■■□□□ 1.06
PCDHGC3Q9UN70 CDCA4P2-201ENST00000441182 718 ntBASIC21.67■■□□□ 1.06
PCDHGC3Q9UN70 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.67■■□□□ 1.06
PCDHGC3Q9UN70 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHGC3Q9UN70 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHGC3Q9UN70 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.67■■□□□ 1.06
PCDHGC3Q9UN70 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGC3Q9UN70 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.67■■□□□ 1.06
PCDHGC3Q9UN70 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHGC3Q9UN70 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHGC3Q9UN70 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGC3Q9UN70 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGC3Q9UN70 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHGC3Q9UN70 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGC3Q9UN70 AC087633.2-202ENST00000565166 1439 ntBASIC21.66■■□□□ 1.06
PCDHGC3Q9UN70 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGC3Q9UN70 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGC3Q9UN70 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGC3Q9UN70 RAP2CP1-201ENST00000605103 478 ntBASIC21.66■■□□□ 1.06
PCDHGC3Q9UN70 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHGC3Q9UN70 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHGC3Q9UN70 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.66■■□□□ 1.06
PCDHGC3Q9UN70 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGC3Q9UN70 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGC3Q9UN70 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGC3Q9UN70 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGC3Q9UN70 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHGC3Q9UN70 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PCDHGC3Q9UN70 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGC3Q9UN70 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGC3Q9UN70 LINC01521-201ENST00000504184 1943 ntBASIC21.65■■□□□ 1.06
PCDHGC3Q9UN70 AC020907.5-201ENST00000624372 1936 ntBASIC21.65■■□□□ 1.06
PCDHGC3Q9UN70 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGC3Q9UN70 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGC3Q9UN70 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHGC3Q9UN70 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGC3Q9UN70 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHGC3Q9UN70 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGC3Q9UN70 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGC3Q9UN70 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGC3Q9UN70 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGC3Q9UN70 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGC3Q9UN70 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
PCDHGC3Q9UN70 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHGC3Q9UN70 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHGC3Q9UN70 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHGC3Q9UN70 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
PCDHGC3Q9UN70 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms